Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8061J12.5.5
        

               Conread position:
               1-180
               

               Cow position:
               chr11:51981584-51981405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               179-254
               

               Cow position:
               chr11:51980944-51980869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               76
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               253-370
               

               Cow position:
               chr11:51979868-51979751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               430-556
               

               Cow position:
               chr11:51978784-51978658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               122
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               7, 122
               

               Conread position:
               547-642
               

               Cow position:
               chr11:51978549-51978454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               640-727
               

               Cow position:
               chr11:51978313-51978226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               726-797
               

               Cow position:
               chr11:51977984-51977913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               72
               

               Alignm identity:
               71
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               796-890
               

               Cow position:
               chr11:51977630-51977536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               889-1097
               

               Cow position:
               chr11:51977442-51977234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1095-1221
               

               Cow position:
               chr11:51977094-51976968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               120
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1215-1311
               

               Cow position:
               chr11:51976810-51976715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1416-2040
               

               Cow position:
               chr11:51976299-51975666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 314
               
Show alignments to all cow chromosomes.