Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A10.5

Conread position: 457-769
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 58, 7

Conread position: 457-838
Cow position:
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 7

Conread position: 466-838
Cow position:
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 469-766
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 8

Conread position: 469-774
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 471-711
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 42, 59

Conread position: 471-838
Cow position:
Alignm length: 399
Alignm identity: 274
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 222, 9

Conread position: 475-768
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 130, 18

Conread position: 475-769
Cow position:
Alignm length: 303
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 107, 18

Conread position: 478-702
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 40

Conread position: 478-834
Cow position:
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 147

Conread position: 482-732
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 130

Conread position: 487-773
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 88, 14

Conread position: 489-835
Cow position:
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 0

Conread position: 490-679
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 38

Conread position: 490-680
Cow position:
Alignm length: 192
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 490-700
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 490-768
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 490-834
Cow position:
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 49

Conread position: 490-838
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 62

Conread position: 491-680
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 27, 39

Conread position: 491-774
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 81

Conread position: 491-835
Cow position:
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 324

Conread position: 492-762
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 21, 34

Conread position: 492-769
Cow position:
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 13

Conread position: 499-685
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 173, 21

Conread position: 499-774
Cow position:
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 169, 18

Conread position: 501-769
Cow position:
Alignm length: 272
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 230, 16

Conread position: 502-831
Cow position:
Alignm length: 334
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 53

Conread position: 503-686
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 52, 112

Conread position: 503-732
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 503-756
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 69, 124

Conread position: 503-759
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 16

Conread position: 503-774
Cow position:
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 27

Conread position: 503-835
Cow position:
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 193

Conread position: 503-843
Cow position:
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 504-825
Cow position:
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 32

Conread position: 504-838
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 22

Conread position: 509-741
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 218, 128

Conread position: 510-764
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 208, 15

Conread position: 510-769
Cow position:
Alignm length: 261
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 59

Conread position: 513-834
Cow position:
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 12

Conread position: 524-725
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 45

Conread position: 525-680
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 527-674
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 528-729
Cow position:
Alignm length: 203
Alignm identity: 160
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 8

Conread position: 529-699
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 529-700
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 529-712
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 184

Conread position: 529-748
Cow position:
Alignm length: 222
Alignm identity: 169
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 20, 155

Conread position: 529-768
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 129, 87

Conread position: 529-773
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 23

Conread position: 529-774
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 37

Conread position: 529-838
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 139, 20

Conread position: 529-851
Cow position:
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 210

Conread position: 531-769
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 189, 75

Conread position: 532-701
Cow position:
Alignm length: 170
Alignm identity: 137
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 532-764
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 52

Conread position: 532-769
Cow position:
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 88

Conread position: 532-774
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 23, 90

Conread position: 533-754
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 533-838
Cow position:
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 122

Conread position: 534-768
Cow position:
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 534-835
Cow position:
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 537-825
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 180, 24

Conread position: 538-702
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 538-772
Cow position:
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 216

Conread position: 539-838
Cow position:
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 545-838
Cow position:
Alignm length: 309
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 68

Conread position: 549-745
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 177, 0

Conread position: 549-769
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 25

Conread position: 549-819
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 167, 14

Conread position: 549-838
Cow position:
Alignm length: 301
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 166, 136

Conread position: 552-768
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 10

Conread position: 552-838
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 165, 61

Conread position: 554-769
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 201, 18

Conread position: 555-838
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 101

Conread position: 557-768
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 172, 115

Conread position: 558-744
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 169, 143

Conread position: 559-773
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 41

Conread position: 559-838
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 126, 146

Conread position: 562-756
Cow position:
Alignm length: 196
Alignm identity: 157
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 36, 94

Conread position: 565-767
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 108

Conread position: 565-838
Cow position:
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 571-753
Cow position:
Alignm length: 184
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 574-715
Cow position:
Alignm length: 147
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 578-710
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 578-730
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 578-769
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 149, 90

Conread position: 578-835
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 115, 0

Conread position: 579-698
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 579-748
Cow position:
Alignm length: 170
Alignm identity: 138
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 91, 0

Conread position: 579-760
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 579-767
Cow position:
Alignm length: 190
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 52

Conread position: 579-769
Cow position:
Alignm length: 192
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 116

Conread position: 581-838
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 189, 73

Conread position: 582-715
Cow position:
Alignm length: 134
Alignm identity: 112
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 587-769
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 50, 46

Conread position: 587-838
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 166, 68

Conread position: 588-763
Cow position:
Alignm length: 177
Alignm identity: 147
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 142, 0

Conread position: 591-838
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 67

Conread position: 591-852
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 110

Conread position: 592-838
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 136, 117

Conread position: 599-835
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 74

Conread position: 603-774
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 88

Conread position: 608-838
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 123, 91

Conread position: 620-773
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 130, 13

Conread position: 621-839
Cow position:
Alignm length: 235
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 136, 105

Conread position: 624-769
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 624-835
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 29, 115

Conread position: 629-768
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 52

Conread position: 630-761
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 130

Conread position: 640-751
Cow position:
Alignm length: 113
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.