Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               456-759
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               456-812
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               241
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               467-845
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 156
               

               Conread position:
               471-699
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               475-774
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               477-838
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 20
               

               Conread position:
               478-838
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               59, 51
               

               Conread position:
               479-850
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               241, 63
               

               Conread position:
               490-751
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               490-753
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               137, 55
               

               Conread position:
               492-835
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               273, 26
               

               Conread position:
               493-838
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               174, 32
               

               Conread position:
               494-766
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               5, 75
               

               Conread position:
               494-767
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               499-718
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               499-724
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               27, 134
               

               Conread position:
               503-710
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-786
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               90, 103
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               504-769
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               505-680
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               509-763
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               221, 160
               

               Conread position:
               511-657
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               127, 140
               

               Conread position:
               511-768
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               157, 57
               

               Conread position:
               511-787
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               521-838
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 10
               

               Conread position:
               524-671
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               524-838
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 16
               

               Conread position:
               525-838
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 27
               

               Conread position:
               527-769
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               529-763
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 140
               

               Conread position:
               531-774
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               219, 156
               

               Conread position:
               532-702
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               532-838
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 111
               

               Conread position:
               533-838
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 60
               

               Conread position:
               533-838
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 185
               

               Conread position:
               534-767
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               138, 175
               

               Conread position:
               535-838
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 33
               

               Conread position:
               536-767
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 106
               

               Conread position:
               536-838
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 43
               

               Conread position:
               545-773
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               10, 185
               

               Conread position:
               547-767
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               205, 107
               

               Conread position:
               547-838
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 84
               

               Conread position:
               549-767
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               549-774
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               164, 78
               

               Conread position:
               553-838
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 195
               

               Conread position:
               554-679
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               555-724
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               555-754
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               555-822
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 171
               

               Conread position:
               561-767
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               562-663
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-774
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               162, 101
               

               Conread position:
               572-745
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               134, 108
               

               Conread position:
               573-752
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               574-838
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               140, 106
               

               Conread position:
               578-680
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               578-724
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               579-763
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               580-838
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               92, 124
               

               Conread position:
               608-841
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               613-772
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 65
               

               Conread position:
               613-835
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               140, 67
               

               Conread position:
               626-835
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               127, 100
               

               Conread position:
               627-834
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 123
               

               Conread position:
               633-835
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               635-838
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 10
               

               Conread position:
               663-838
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 77
               
Show alignments to all cow chromosomes.