Cow genome map
Conread name: | Ss1.1-Pig4-TMW8062A10.5 |
Conread position: | 373-769 |
Cow position: | chr11:50040353-50040751 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 11 |
Conread position: | 383-810 |
Cow position: | chr11:18139480-18139038 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 396 |
Conread position: | 411-838 |
Cow position: | chr11:19228092-19228520 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 296 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 65, 56 |
Conread position: | 416-676 |
Cow position: | chr11:25356091-25355839 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 188 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 139, 18 |
Conread position: | 443-765 |
Cow position: | chr11:65479784-65479468 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 223 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 93, 28 |
Conread position: | 444-833 |
Cow position: | chr11:31815254-31815625 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 259 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 17, 42 |
Conread position: | 460-835 |
Cow position: | chr11:64035046-64035425 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 6 |
Conread position: | 468-835 |
Cow position: | chr11:58354708-58355072 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 271 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 9, 143 |
Conread position: | 475-661 |
Cow position: | chr11:6887246-6887063 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 141 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 475-835 |
Cow position: | chr11:71161916-71161545 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 18 |
Conread position: | 477-740 |
Cow position: | chr11:37318333-37318597 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 255, 0 |
Conread position: | 478-767 |
Cow position: | chr11:12336533-12336236 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 219 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 78, 41 |
Conread position: | 479-714 |
Cow position: | chr11:81837598-81837830 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 167 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 216, 14 |
Conread position: | 479-838 |
Cow position: | chr11:3612369-3612722 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 14 |
Conread position: | 480-725 |
Cow position: | chr11:41226273-41226029 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 184 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 36, 46 |
Conread position: | 486-667 |
Cow position: | chr11:35616993-35616812 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 134 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 7, 17 |
Conread position: | 490-695 |
Cow position: | chr11:70694098-70694309 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 152 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 23, 36 |
Conread position: | 490-698 |
Cow position: | chr11:35745515-35745718 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 157 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 26, 37 |
Conread position: | 490-805 |
Cow position: | chr11:11396501-11396817 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 224 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 44, 37 |
Conread position: | 490-822 |
Cow position: | chr11:65753239-65752884 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 490-838 |
Cow position: | chr11:14191593-14191229 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 77 |
Conread position: | 490-838 |
Cow position: | chr11:36397153-36397505 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 34 |
Conread position: | 490-838 |
Cow position: | chr11:37328161-37328505 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 173 |
Conread position: | 492-839 |
Cow position: | chr11:83266375-83266024 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 234 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 72, 26 |
Conread position: | 493-725 |
Cow position: | chr11:48074040-48074274 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 174 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 127, 27 |
Conread position: | 502-750 |
Cow position: | chr11:6752780-6753025 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 23 |
Conread position: | 502-838 |
Cow position: | chr11:12320823-12320466 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 503-754 |
Cow position: | chr11:59969522-59969775 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 503-769 |
Cow position: | chr11:72345174-72344912 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 28 |
Conread position: | 503-830 |
Cow position: | chr11:32075566-32075891 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 26 |
Conread position: | 503-838 |
Cow position: | chr11:8557181-8557528 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 33 |
Conread position: | 503-838 |
Cow position: | chr11:18180112-18179782 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 236 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 259, 176 |
Conread position: | 504-680 |
Cow position: | chr11:40512324-40512149 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 11, 29 |
Conread position: | 504-759 |
Cow position: | chr11:30473936-30474191 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 33 |
Conread position: | 505-754 |
Cow position: | chr11:3743777-3744023 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 182 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 12, 25 |
Conread position: | 509-769 |
Cow position: | chr11:83086503-83086756 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 194 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 6, 24 |
Conread position: | 509-774 |
Cow position: | chr11:85701659-85701928 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 202 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 15, 47 |
Conread position: | 510-676 |
Cow position: | chr11:55183680-55183515 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 518-834 |
Cow position: | chr11:75129799-75129473 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 305 |
Conread position: | 520-724 |
Cow position: | chr11:83551547-83551750 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 155 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 154, 12 |
Conread position: | 521-664 |
Cow position: | chr11:68169533-68169383 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 117, 34 |
Conread position: | 521-676 |
Cow position: | chr11:40582673-40582524 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 524-838 |
Cow position: | chr11:63667014-63667337 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 28 |
Conread position: | 525-657 |
Cow position: | chr11:33190085-33189953 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 527-749 |
Cow position: | chr11:45820923-45821146 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 174 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 51, 209 |
Conread position: | 529-730 |
Cow position: | chr11:433159-433355 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 190, 58 |
Conread position: | 529-756 |
Cow position: | chr11:47884899-47885121 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 178 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 225, 143 |
Conread position: | 529-769 |
Cow position: | chr11:59989457-59989206 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 192 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 139, 191 |
Conread position: | 529-774 |
Cow position: | chr11:2895013-2894768 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 183 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 225, 7 |
Conread position: | 529-774 |
Cow position: | chr11:61469413-61469660 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 183 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 100, 116 |
Conread position: | 531-754 |
Cow position: | chr11:37724344-37724124 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 23 |
Conread position: | 531-838 |
Cow position: | chr11:63283167-63283481 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 124 |
Conread position: | 532-802 |
Cow position: | chr11:58355591-58355853 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 197 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 539-725 |
Cow position: | chr11:30220292-30220479 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 145 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 5, 14 |
Conread position: | 543-765 |
Cow position: | chr11:45492416-45492643 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 177 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 5, 188 |
Conread position: | 545-834 |
Cow position: | chr11:75202533-75202234 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 7 |
Conread position: | 547-832 |
Cow position: | chr11:33442368-33442669 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 179, 76 |
Conread position: | 548-838 |
Cow position: | chr11:14678025-14678316 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 98 |
Conread position: | 549-688 |
Cow position: | chr11:3716017-3715879 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 130, 10 |
Conread position: | 549-764 |
Cow position: | chr11:7005463-7005677 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 151 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 549-774 |
Cow position: | chr11:31402474-31402259 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 158 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 168, 14 |
Conread position: | 549-786 |
Cow position: | chr11:37136601-37136835 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 179 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 166, 106 |
Conread position: | 552-766 |
Cow position: | chr11:30923475-30923266 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 152 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 128, 10 |
Conread position: | 552-768 |
Cow position: | chr11:9715852-9715639 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 150 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 97, 10 |
Conread position: | 552-834 |
Cow position: | chr11:31771170-31770881 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 201 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 128, 10 |
Conread position: | 552-838 |
Cow position: | chr11:32770464-32770757 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 212 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 170, 125 |
Conread position: | 554-686 |
Cow position: | chr11:41030294-41030160 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 25, 73 |
Conread position: | 555-748 |
Cow position: | chr11:63238227-63238418 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 147 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 162, 105 |
Conread position: | 555-761 |
Cow position: | chr11:7066910-7066700 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 150 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 46, 175 |
Conread position: | 555-834 |
Cow position: | chr11:31398435-31398713 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 204 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 164, 88 |
Conread position: | 555-834 |
Cow position: | chr11:31815995-31816284 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 217 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 140, 97 |
Conread position: | 558-773 |
Cow position: | chr11:68237065-68236849 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 162 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 159, 37 |
Conread position: | 562-769 |
Cow position: | chr11:8237390-8237188 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 150 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 193, 92 |
Conread position: | 563-774 |
Cow position: | chr11:49009888-49009677 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 155 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 154, 101 |
Conread position: | 571-701 |
Cow position: | chr11:75167763-75167633 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 108 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 571-834 |
Cow position: | chr11:2068846-2069118 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 208 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 189, 18 |
Conread position: | 573-769 |
Cow position: | chr11:7549213-7549023 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 579-759 |
Cow position: | chr11:51805559-51805739 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 579-838 |
Cow position: | chr11:52785847-52785579 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 64 |
Conread position: | 590-743 |
Cow position: | chr11:8306535-8306386 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 126 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 590-822 |
Cow position: | chr11:86667095-86667333 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 173 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 143, 69 |
Conread position: | 591-838 |
Cow position: | chr11:31348408-31348671 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 205 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 82, 152 |
Conread position: | 597-802 |
Cow position: | chr11:6419199-6418989 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 163 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 628-838 |
Cow position: | chr11:27300168-27300373 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 127, 144 |
Conread position: | 632-767 |
Cow position: | chr11:7066086-7065948 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 85, 46 |
Conread position: | 634-759 |
Cow position: | chr11:70684160-70684286 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 640-765 |
Cow position: | chr11:2891918-2891793 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 108 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 640-769 |
Cow position: | chr11:31887231-31887360 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 100 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.