Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               373-769
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               383-810
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 396
               

               Conread position:
               411-838
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               416-676
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 18
               

               Conread position:
               443-765
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               93, 28
               

               Conread position:
               444-833
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               460-835
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 6
               

               Conread position:
               468-835
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               9, 143
               

               Conread position:
               475-661
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               475-835
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               477-740
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 0
               

               Conread position:
               478-767
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               479-714
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               216, 14
               

               Conread position:
               479-838
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 14
               

               Conread position:
               480-725
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               486-667
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               490-695
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               490-698
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               490-805
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               490-822
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 77
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 34
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 173
               

               Conread position:
               492-839
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               72, 26
               

               Conread position:
               493-725
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               127, 27
               

               Conread position:
               502-750
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 23
               

               Conread position:
               502-838
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               503-754
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               503-830
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 26
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 33
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               259, 176
               

               Conread position:
               504-680
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               504-759
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               505-754
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               509-769
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               6, 24
               

               Conread position:
               509-774
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               510-676
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               518-834
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 305
               

               Conread position:
               520-724
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               154, 12
               

               Conread position:
               521-664
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               521-676
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               524-838
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 28
               

               Conread position:
               525-657
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               527-749
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 209
               

               Conread position:
               529-730
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               190, 58
               

               Conread position:
               529-756
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               225, 143
               

               Conread position:
               529-769
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               139, 191
               

               Conread position:
               529-774
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               225, 7
               

               Conread position:
               529-774
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               100, 116
               

               Conread position:
               531-754
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               531-838
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 124
               

               Conread position:
               532-802
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               539-725
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               543-765
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               5, 188
               

               Conread position:
               545-834
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 7
               

               Conread position:
               547-832
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               179, 76
               

               Conread position:
               548-838
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 98
               

               Conread position:
               549-688
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 10
               

               Conread position:
               549-764
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               549-774
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               168, 14
               

               Conread position:
               549-786
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               166, 106
               

               Conread position:
               552-766
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               128, 10
               

               Conread position:
               552-768
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               97, 10
               

               Conread position:
               552-834
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               128, 10
               

               Conread position:
               552-838
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               170, 125
               

               Conread position:
               554-686
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 73
               

               Conread position:
               555-748
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               162, 105
               

               Conread position:
               555-761
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               46, 175
               

               Conread position:
               555-834
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               164, 88
               

               Conread position:
               555-834
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               140, 97
               

               Conread position:
               558-773
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               159, 37
               

               Conread position:
               562-769
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               193, 92
               

               Conread position:
               563-774
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               154, 101
               

               Conread position:
               571-701
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-834
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               189, 18
               

               Conread position:
               573-769
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               579-759
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-838
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 64
               

               Conread position:
               590-743
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               590-822
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               591-838
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               82, 152
               

               Conread position:
               597-802
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               628-838
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 144
               

               Conread position:
               632-767
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               634-759
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               640-765
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               640-769
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.