Cow genome map
Conread name: | Ss1.1-Pig4-TMW8062A10.5 |
Conread position: | 398-838 |
Cow position: | chr12:46752662-46752234 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 298 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 16, 40 |
Conread position: | 416-838 |
Cow position: | chr12:24333905-24334344 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 52 |
Conread position: | 466-773 |
Cow position: | chr12:20841176-20840868 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 55 |
Conread position: | 467-756 |
Cow position: | chr12:45811412-45811703 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 24 |
Conread position: | 471-822 |
Cow position: | chr12:47951788-47952138 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 241 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 49, 86 |
Conread position: | 471-822 |
Cow position: | chr12:47975655-47976005 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 241 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 49, 86 |
Conread position: | 473-725 |
Cow position: | chr12:13153775-13153528 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 181 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 20, 33 |
Conread position: | 475-786 |
Cow position: | chr12:43992637-43992944 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 18 |
Conread position: | 490-698 |
Cow position: | chr12:26549798-26550006 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 162 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 44, 63 |
Conread position: | 490-718 |
Cow position: | chr12:38589153-38589380 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 114 |
Conread position: | 490-838 |
Cow position: | chr12:13158836-13158497 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 33 |
Conread position: | 492-838 |
Cow position: | chr12:37482086-37481725 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 35 |
Conread position: | 499-769 |
Cow position: | chr12:37465937-37465664 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 19 |
Conread position: | 503-687 |
Cow position: | chr12:10682468-10682641 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 135 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 52, 29 |
Conread position: | 503-838 |
Cow position: | chr12:10878788-10878447 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 27 |
Conread position: | 504-774 |
Cow position: | chr12:7442827-7443098 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 42 |
Conread position: | 504-822 |
Cow position: | chr12:46035160-46034826 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 245 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 28, 228 |
Conread position: | 511-768 |
Cow position: | chr12:2006033-2005777 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 152 |
Conread position: | 514-763 |
Cow position: | chr12:48384640-48384390 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 191 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 202, 38 |
Conread position: | 524-763 |
Cow position: | chr12:1664883-1664638 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 185 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 121, 150 |
Conread position: | 524-834 |
Cow position: | chr12:41468321-41468006 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 95 |
Conread position: | 528-725 |
Cow position: | chr12:29863523-29863718 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 146 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 85, 94 |
Conread position: | 529-667 |
Cow position: | chr12:11045305-11045445 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 105 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 529-773 |
Cow position: | chr12:42787256-42787499 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 44 |
Conread position: | 536-768 |
Cow position: | chr12:34351740-34351974 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 132 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 200, 9 |
Conread position: | 540-670 |
Cow position: | chr12:17334623-17334754 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 540-754 |
Cow position: | chr12:39122895-39123106 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 162 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 545-759 |
Cow position: | chr12:41190162-41189958 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 157 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 161, 90 |
Conread position: | 557-763 |
Cow position: | chr12:40080323-40080531 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 149 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 145, 115 |
Conread position: | 557-769 |
Cow position: | chr12:4540218-4540436 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 156 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 168, 152 |
Conread position: | 557-838 |
Cow position: | chr12:21884778-21885056 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 210 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 170, 95 |
Conread position: | 562-835 |
Cow position: | chr12:18017375-18017106 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 81, 143 |
Conread position: | 571-769 |
Cow position: | chr12:7923590-7923390 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 151 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 119, 102 |
Conread position: | 574-759 |
Cow position: | chr12:4138090-4137906 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 147 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 578-721 |
Cow position: | chr12:26616210-26616355 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 123 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 592-751 |
Cow position: | chr12:5694582-5694740 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 130 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 138, 53 |
Conread position: | 609-838 |
Cow position: | chr12:47190469-47190231 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 164 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 16, 107 |
Conread position: | 656-753 |
Cow position: | chr12:27871866-27871963 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 83 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.