Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A10.5

Conread position: 398-838
Cow position: chr12:46752662-46752234 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 298
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 40

Conread position: 416-838
Cow position: chr12:24333905-24334344 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 52

Conread position: 466-773
Cow position: chr12:20841176-20840868 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 55

Conread position: 467-756
Cow position: chr12:45811412-45811703 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 24

Conread position: 471-822
Cow position: chr12:47951788-47952138 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 86

Conread position: 471-822
Cow position: chr12:47975655-47976005 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 86

Conread position: 473-725
Cow position: chr12:13153775-13153528 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 33

Conread position: 475-786
Cow position: chr12:43992637-43992944 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 490-698
Cow position: chr12:26549798-26550006 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 63

Conread position: 490-718
Cow position: chr12:38589153-38589380 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 114

Conread position: 490-838
Cow position: chr12:13158836-13158497 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 33

Conread position: 492-838
Cow position: chr12:37482086-37481725 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 35

Conread position: 499-769
Cow position: chr12:37465937-37465664 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 503-687
Cow position: chr12:10682468-10682641 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 29

Conread position: 503-838
Cow position: chr12:10878788-10878447 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 27

Conread position: 504-774
Cow position: chr12:7442827-7443098 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 42

Conread position: 504-822
Cow position: chr12:46035160-46034826 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 28, 228

Conread position: 511-768
Cow position: chr12:2006033-2005777 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 152

Conread position: 514-763
Cow position: chr12:48384640-48384390 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 202, 38

Conread position: 524-763
Cow position: chr12:1664883-1664638 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 150

Conread position: 524-834
Cow position: chr12:41468321-41468006 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 95

Conread position: 528-725
Cow position: chr12:29863523-29863718 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 85, 94

Conread position: 529-667
Cow position: chr12:11045305-11045445 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 529-773
Cow position: chr12:42787256-42787499 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 44

Conread position: 536-768
Cow position: chr12:34351740-34351974 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 200, 9

Conread position: 540-670
Cow position: chr12:17334623-17334754 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 540-754
Cow position: chr12:39122895-39123106 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 78, 0

Conread position: 545-759
Cow position: chr12:41190162-41189958 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 161, 90

Conread position: 557-763
Cow position: chr12:40080323-40080531 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 145, 115

Conread position: 557-769
Cow position: chr12:4540218-4540436 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 168, 152

Conread position: 557-838
Cow position: chr12:21884778-21885056 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 170, 95

Conread position: 562-835
Cow position: chr12:18017375-18017106 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 81, 143

Conread position: 571-769
Cow position: chr12:7923590-7923390 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 102

Conread position: 574-759
Cow position: chr12:4138090-4137906 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 97, 0

Conread position: 578-721
Cow position: chr12:26616210-26616355 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 123
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 592-751
Cow position: chr12:5694582-5694740 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 53

Conread position: 609-838
Cow position: chr12:47190469-47190231 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 107

Conread position: 656-753
Cow position: chr12:27871866-27871963 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.