Cow genome map
Conread name: | Ss1.1-Pig4-TMW8062A10.5 |
Conread position: | 411-838 |
Cow position: | chr13:6063108-6063537 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 31 |
Conread position: | 456-769 |
Cow position: | chr13:30335698-30335390 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 227 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 59, 8 |
Conread position: | 457-698 |
Cow position: | chr13:43783863-43784101 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 173 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 18, 7 |
Conread position: | 457-743 |
Cow position: | chr13:30325074-30324793 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 7 |
Conread position: | 463-838 |
Cow position: | chr13:54409124-54409519 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 14 |
Conread position: | 466-838 |
Cow position: | chr13:5245035-5244670 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 55 |
Conread position: | 468-671 |
Cow position: | chr13:27710736-27710936 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 141 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 473-691 |
Cow position: | chr13:50784783-50784997 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 158 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 478-838 |
Cow position: | chr13:22109110-22109462 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 42 |
Conread position: | 478-838 |
Cow position: | chr13:22169811-22170163 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 42 |
Conread position: | 479-735 |
Cow position: | chr13:54346233-54345981 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 190 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 227, 14 |
Conread position: | 480-682 |
Cow position: | chr13:24633416-24633622 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 155 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 26, 75 |
Conread position: | 480-684 |
Cow position: | chr13:34872670-34872472 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 79, 13 |
Conread position: | 489-748 |
Cow position: | chr13:47665731-47665459 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 194 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 5, 22 |
Conread position: | 490-717 |
Cow position: | chr13:10002983-10003207 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 160 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 66, 166 |
Conread position: | 490-767 |
Cow position: | chr13:60239953-60240224 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 199 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 102, 28 |
Conread position: | 490-769 |
Cow position: | chr13:52852315-52852036 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 36 |
Conread position: | 491-724 |
Cow position: | chr13:49625193-49624968 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 170 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 24, 35 |
Conread position: | 491-838 |
Cow position: | chr13:52328947-52328591 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 39 |
Conread position: | 492-754 |
Cow position: | chr13:15310401-15310658 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 12 |
Conread position: | 493-724 |
Cow position: | chr13:52693558-52693333 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 175 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 25, 34 |
Conread position: | 493-754 |
Cow position: | chr13:2780870-2780615 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 9 |
Conread position: | 499-845 |
Cow position: | chr13:52184057-52184427 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 351 |
Conread position: | 502-767 |
Cow position: | chr13:5610396-5610663 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 0 |
Conread position: | 503-630 |
Cow position: | chr13:20806532-20806659 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 12, 27 |
Conread position: | 503-748 |
Cow position: | chr13:18860439-18860196 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 128 |
Conread position: | 503-748 |
Cow position: | chr13:31488716-31488953 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 183 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 12, 27 |
Conread position: | 503-753 |
Cow position: | chr13:13556956-13557203 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 185 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 503-769 |
Cow position: | chr13:14863769-14863507 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 28 |
Conread position: | 503-769 |
Cow position: | chr13:34189979-34189713 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 103 |
Conread position: | 503-769 |
Cow position: | chr13:49454239-49454502 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 177 |
Conread position: | 503-769 |
Cow position: | chr13:50787332-50787066 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 27 |
Conread position: | 503-774 |
Cow position: | chr13:52849599-52849876 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 205 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 43, 176 |
Conread position: | 503-828 |
Cow position: | chr13:42124272-42124609 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 246 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 38, 43 |
Conread position: | 503-838 |
Cow position: | chr13:42101900-42101548 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 504-838 |
Cow position: | chr13:36820275-36820620 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 24 |
Conread position: | 505-833 |
Cow position: | chr13:14726626-14726294 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 41 |
Conread position: | 509-724 |
Cow position: | chr13:15347877-15348093 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 167 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 9, 17 |
Conread position: | 520-677 |
Cow position: | chr13:57386092-57385935 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 527-838 |
Cow position: | chr13:4802653-4802349 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 219 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 30, 130 |
Conread position: | 529-755 |
Cow position: | chr13:14574532-14574306 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 39 |
Conread position: | 529-768 |
Cow position: | chr13:54718550-54718787 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 159 |
Conread position: | 529-838 |
Cow position: | chr13:26005103-26005427 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 184 |
Conread position: | 529-838 |
Cow position: | chr13:41690852-41691170 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 230 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 211, 95 |
Conread position: | 529-841 |
Cow position: | chr13:5249605-5249280 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 530-774 |
Cow position: | chr13:17580945-17580697 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 182 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 153, 65 |
Conread position: | 531-834 |
Cow position: | chr13:31483141-31483455 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 40 |
Conread position: | 531-840 |
Cow position: | chr13:722870-722557 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 143 |
Conread position: | 532-768 |
Cow position: | chr13:17121529-17121291 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 532-834 |
Cow position: | chr13:22108275-22108579 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 13 |
Conread position: | 532-834 |
Cow position: | chr13:22169007-22169306 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 13 |
Conread position: | 532-835 |
Cow position: | chr13:14917756-14917446 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 0 |
Conread position: | 534-671 |
Cow position: | chr13:19329135-19329273 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 24, 58 |
Conread position: | 545-726 |
Cow position: | chr13:49710746-49710922 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 140 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 78, 107 |
Conread position: | 545-769 |
Cow position: | chr13:26324882-26324665 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 174 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 22, 146 |
Conread position: | 546-838 |
Cow position: | chr13:50813477-50813785 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 181 |
Conread position: | 549-752 |
Cow position: | chr13:26935024-26935223 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 159 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 146, 106 |
Conread position: | 549-754 |
Cow position: | chr13:50117344-50117549 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 162 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 562-768 |
Cow position: | chr13:13800084-13800290 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 166 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 102 |
Conread position: | 571-671 |
Cow position: | chr13:23125043-23125143 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 83 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 571-748 |
Cow position: | chr13:55380451-55380626 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 142 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 571-768 |
Cow position: | chr13:13559595-13559402 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 159 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 574-738 |
Cow position: | chr13:47305110-47305270 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 129 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 153, 37 |
Conread position: | 574-767 |
Cow position: | chr13:8427620-8427425 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 100, 135 |
Conread position: | 574-838 |
Cow position: | chr13:1902307-1902036 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 201 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 173, 107 |
Conread position: | 578-838 |
Cow position: | chr13:33006445-33006720 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 582-740 |
Cow position: | chr13:22948018-22948175 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 126 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 612-769 |
Cow position: | chr13:1597510-1597668 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 129 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 142, 0 |
Conread position: | 627-769 |
Cow position: | chr13:27505636-27505500 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 107, 52 |
Show alignments to all cow chromosomes.