Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               411-838
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 31
               

               Conread position:
               456-769
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               457-698
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               457-743
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 7
               

               Conread position:
               463-838
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 14
               

               Conread position:
               466-838
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 55
               

               Conread position:
               468-671
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               473-691
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               478-838
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 42
               

               Conread position:
               478-838
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 42
               

               Conread position:
               479-735
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               227, 14
               

               Conread position:
               480-682
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               480-684
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               489-748
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 22
               

               Conread position:
               490-717
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 166
               

               Conread position:
               490-767
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               490-769
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 36
               

               Conread position:
               491-724
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               491-838
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               492-754
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               493-724
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               493-754
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 9
               

               Conread position:
               499-845
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 351
               

               Conread position:
               502-767
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 0
               

               Conread position:
               503-630
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-748
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 128
               

               Conread position:
               503-748
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-753
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 103
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 177
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-774
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               503-828
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               505-833
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 41
               

               Conread position:
               509-724
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               520-677
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               527-838
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               30, 130
               

               Conread position:
               529-755
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               529-768
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 159
               

               Conread position:
               529-838
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 184
               

               Conread position:
               529-838
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               211, 95
               

               Conread position:
               529-841
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               530-774
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               153, 65
               

               Conread position:
               531-834
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 40
               

               Conread position:
               531-840
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 143
               

               Conread position:
               532-768
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               532-834
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 13
               

               Conread position:
               532-834
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               532-835
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               534-671
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               545-726
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 107
               

               Conread position:
               545-769
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               22, 146
               

               Conread position:
               546-838
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 181
               

               Conread position:
               549-752
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               146, 106
               

               Conread position:
               549-754
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-768
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 102
               

               Conread position:
               571-671
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-748
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               571-768
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               574-738
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               153, 37
               

               Conread position:
               574-767
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 135
               

               Conread position:
               574-838
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               173, 107
               

               Conread position:
               578-838
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               582-740
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               612-769
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               627-769
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               107, 52
               
Show alignments to all cow chromosomes.