Cow genome map
Conread name: | Ss1.1-Pig4-TMW8062A10.5 |
Conread position: | 386-838 |
Cow position: | chr14:5569730-5570183 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 76 |
Conread position: | 411-838 |
Cow position: | chr14:47013903-47013465 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 32 |
Conread position: | 457-752 |
Cow position: | chr14:2343523-2343810 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 7 |
Conread position: | 457-763 |
Cow position: | chr14:5357175-5356858 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 7 |
Conread position: | 457-841 |
Cow position: | chr14:2279358-2278949 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 7 |
Conread position: | 466-763 |
Cow position: | chr14:23755262-23754977 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 55 |
Conread position: | 467-774 |
Cow position: | chr14:7149519-7149217 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 11 |
Conread position: | 468-671 |
Cow position: | chr14:18439127-18439332 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 157 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 480-774 |
Cow position: | chr14:8456447-8456756 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 220 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 37, 151 |
Conread position: | 484-838 |
Cow position: | chr14:38359732-38359376 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 44 |
Conread position: | 488-838 |
Cow position: | chr14:20887648-20887288 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 52 |
Conread position: | 489-838 |
Cow position: | chr14:18579084-18579446 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 36 |
Conread position: | 490-672 |
Cow position: | chr14:8458122-8458312 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 143 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 490-769 |
Cow position: | chr14:50468820-50468535 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 35 |
Conread position: | 490-774 |
Cow position: | chr14:13722503-13722231 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 196 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 28, 45 |
Conread position: | 490-834 |
Cow position: | chr14:7115737-7116108 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 29 |
Conread position: | 490-838 |
Cow position: | chr14:23148669-23149027 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 62 |
Conread position: | 490-841 |
Cow position: | chr14:37249915-37249555 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 27 |
Conread position: | 491-668 |
Cow position: | chr14:4234194-4234373 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 128 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 166, 34 |
Conread position: | 491-765 |
Cow position: | chr14:11076189-11075914 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 208 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 24, 11 |
Conread position: | 492-769 |
Cow position: | chr14:45731368-45731095 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 203 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 24, 11 |
Conread position: | 492-838 |
Cow position: | chr14:16517696-16517339 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 76 |
Conread position: | 499-769 |
Cow position: | chr14:44539422-44539149 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 196 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 153, 30 |
Conread position: | 499-835 |
Cow position: | chr14:33534554-33534220 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 226 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 268, 30 |
Conread position: | 501-724 |
Cow position: | chr14:33436561-33436336 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 171 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 33, 17 |
Conread position: | 503-738 |
Cow position: | chr14:17394596-17394836 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 178 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 503-753 |
Cow position: | chr14:10082084-10081834 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 503-762 |
Cow position: | chr14:26257679-26257425 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 187 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 12, 25 |
Conread position: | 503-769 |
Cow position: | chr14:40014236-40013975 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 188 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 12, 27 |
Conread position: | 503-835 |
Cow position: | chr14:23149711-23150064 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 0 |
Conread position: | 503-838 |
Cow position: | chr14:12246593-12246945 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 50 |
Conread position: | 503-838 |
Cow position: | chr14:32728926-32728598 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 229 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 65, 142 |
Conread position: | 504-745 |
Cow position: | chr14:19838459-19838699 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 181 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 51, 65 |
Conread position: | 504-754 |
Cow position: | chr14:45594401-45594651 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 24 |
Conread position: | 504-761 |
Cow position: | chr14:1068769-1068513 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 185 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 40, 25 |
Conread position: | 504-762 |
Cow position: | chr14:26260862-26260609 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 186 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 11, 24 |
Conread position: | 504-821 |
Cow position: | chr14:45733778-45734099 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 225 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 51, 65 |
Conread position: | 504-838 |
Cow position: | chr14:15756925-15756575 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 26 |
Conread position: | 505-838 |
Cow position: | chr14:26194536-26194192 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 240 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 56, 27 |
Conread position: | 510-700 |
Cow position: | chr14:10489007-10488817 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 149 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 45, 8 |
Conread position: | 513-772 |
Cow position: | chr14:47152020-47151749 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 200 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 209, 16 |
Conread position: | 520-724 |
Cow position: | chr14:4722364-4722564 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 157 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 177, 127 |
Conread position: | 529-748 |
Cow position: | chr14:16026476-16026258 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 165 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 529-755 |
Cow position: | chr14:1533996-1533770 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 166 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 39, 25 |
Conread position: | 530-774 |
Cow position: | chr14:28755250-28755016 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 178 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 156, 30 |
Conread position: | 532-769 |
Cow position: | chr14:13153442-13153201 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 182 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 532-838 |
Cow position: | chr14:45779964-45780282 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 151 |
Conread position: | 534-838 |
Cow position: | chr14:26040534-26040853 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 0 |
Conread position: | 539-751 |
Cow position: | chr14:3703100-3703315 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 169 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 5, 50 |
Conread position: | 547-724 |
Cow position: | chr14:25503298-25503124 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 136 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 169, 5 |
Conread position: | 549-697 |
Cow position: | chr14:21681666-21681819 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 89, 64 |
Conread position: | 549-718 |
Cow position: | chr14:34097013-34097179 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 150, 0 |
Conread position: | 552-769 |
Cow position: | chr14:8037375-8037167 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 164 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 553-828 |
Cow position: | chr14:1858246-1857956 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 214 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 90, 58 |
Conread position: | 559-834 |
Cow position: | chr14:43375614-43375904 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 202 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 11, 115 |
Conread position: | 559-838 |
Cow position: | chr14:20883146-20883439 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 213 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 167, 114 |
Conread position: | 571-838 |
Cow position: | chr14:11104361-11104632 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 97 |
Conread position: | 578-713 |
Cow position: | chr14:30647829-30647697 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 103 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 578-838 |
Cow position: | chr14:25935501-25935232 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 199 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 159, 0 |
Conread position: | 579-680 |
Cow position: | chr14:11074917-11075018 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 92 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 579-769 |
Cow position: | chr14:1505937-1505743 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 140 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 110, 149 |
Conread position: | 584-834 |
Cow position: | chr14:20887795-20888039 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 132 |
Conread position: | 585-768 |
Cow position: | chr14:48757813-48757630 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 135, 147 |
Conread position: | 603-838 |
Cow position: | chr14:25504614-25504364 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 191 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 36, 86 |
Conread position: | 621-835 |
Cow position: | chr14:20690346-20690113 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 51, 65 |
Conread position: | 621-838 |
Cow position: | chr14:18428783-18429009 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 170 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 133, 34 |
Conread position: | 630-838 |
Cow position: | chr14:2316665-2316874 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 149 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 119, 96 |
Conread position: | 641-838 |
Cow position: | chr14:26264883-26265097 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 160 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.