Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               444-838
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               284
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               466-698
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               466-769
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 189
               

               Conread position:
               470-656
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               64, 10
               

               Conread position:
               471-838
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               474-631
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 100
               

               Conread position:
               480-838
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 332
               

               Conread position:
               483-838
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               54, 47
               

               Conread position:
               485-753
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 64
               

               Conread position:
               490-748
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 166
               

               Conread position:
               490-765
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               60, 43
               

               Conread position:
               490-769
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 0
               

               Conread position:
               491-724
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               499-838
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 26
               

               Conread position:
               503-767
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               503-834
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               16, 315
               

               Conread position:
               504-748
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               509-720
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 200
               

               Conread position:
               510-767
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 195
               

               Conread position:
               510-838
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               224, 42
               

               Conread position:
               524-695
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               524-699
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               524-764
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 154
               

               Conread position:
               529-740
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               198, 168
               

               Conread position:
               529-753
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 120
               

               Conread position:
               529-769
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 43
               

               Conread position:
               529-822
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               222, 78
               

               Conread position:
               532-672
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               532-693
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               532-769
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               200, 161
               

               Conread position:
               532-773
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               23, 166
               

               Conread position:
               534-834
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               21, 121
               

               Conread position:
               540-745
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 117
               

               Conread position:
               544-821
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               173, 87
               

               Conread position:
               548-782
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               180, 89
               

               Conread position:
               548-835
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               552-768
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               128, 10
               

               Conread position:
               552-774
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               145, 32
               

               Conread position:
               552-838
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 163
               

               Conread position:
               553-676
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-774
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               200, 64
               

               Conread position:
               555-753
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               130, 97
               

               Conread position:
               561-748
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               565-830
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               80, 50
               

               Conread position:
               571-769
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               161, 73
               

               Conread position:
               571-838
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               70, 89
               

               Conread position:
               574-838
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 74
               

               Conread position:
               578-764
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               578-769
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               142, 74
               

               Conread position:
               579-838
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               116, 158
               

               Conread position:
               581-838
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               146, 115
               

               Conread position:
               583-838
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 55
               

               Conread position:
               585-774
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               165, 89
               

               Conread position:
               590-767
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               103, 170
               

               Conread position:
               591-838
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               141, 81
               

               Conread position:
               595-838
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               615-764
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               618-835
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               623-774
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               137, 51
               

               Conread position:
               628-769
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               127, 62
               

               Conread position:
               631-838
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               122, 50
               

               Conread position:
               636-838
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               119, 0
               
Show alignments to all cow chromosomes.