Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               456-759
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               457-838
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               465-828
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 60
               

               Conread position:
               467-688
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               476-835
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               251, 50
               

               Conread position:
               477-701
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               477-838
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 266
               

               Conread position:
               479-698
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               479-835
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               253, 14
               

               Conread position:
               483-774
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               484-838
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               485-621
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               485-670
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               490-717
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               44, 142
               

               Conread position:
               490-724
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               490-834
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 35
               

               Conread position:
               490-835
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 64
               

               Conread position:
               491-666
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               84, 42
               

               Conread position:
               491-695
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               491-754
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               491-834
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 169
               

               Conread position:
               492-674
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               150
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               492-774
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               492-787
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 133
               

               Conread position:
               499-682
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               130, 21
               

               Conread position:
               499-838
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               503-636
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-756
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-835
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 15
               

               Conread position:
               503-843
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               268, 49
               

               Conread position:
               504-710
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               504-710
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               504-714
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               504-769
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               504-769
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               510-818
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 0
               

               Conread position:
               520-769
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               521-833
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               521-838
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 37
               

               Conread position:
               523-838
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               9, 180
               

               Conread position:
               526-838
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               239, 142
               

               Conread position:
               529-769
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               529-825
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               191, 138
               

               Conread position:
               530-838
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               275, 110
               

               Conread position:
               531-748
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               532-763
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               533-671
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               5, 21
               

               Conread position:
               534-700
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               534-714
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               534-754
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               540-768
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 5
               

               Conread position:
               545-753
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               545-838
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               101, 52
               

               Conread position:
               548-696
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               549-748
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               168, 106
               

               Conread position:
               549-768
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               168, 14
               

               Conread position:
               549-774
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               134, 14
               

               Conread position:
               552-680
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               552-828
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               128, 10
               

               Conread position:
               552-838
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               154, 128
               

               Conread position:
               554-774
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               206, 18
               

               Conread position:
               555-755
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               186, 58
               

               Conread position:
               557-691
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               557-838
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               558-817
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               249, 88
               

               Conread position:
               562-838
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 55
               

               Conread position:
               568-705
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               570-756
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               104, 65
               

               Conread position:
               571-701
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               583-838
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               75, 41
               

               Conread position:
               584-765
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               153
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               584-838
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               177, 51
               

               Conread position:
               586-769
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               587-825
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               140, 73
               

               Conread position:
               590-838
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               612-769
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               625-769
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               628-769
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               125, 67
               

               Conread position:
               629-838
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               119, 159
               
Show alignments to all cow chromosomes.