Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A10.5

Conread position: 435-838
Cow position: chr17:22808839-22808442 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 457-680
Cow position: chr17:1777018-1777233 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 21, 7

Conread position: 457-684
Cow position: chr17:4711-4490 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 457-838
Cow position: chr17:3829701-3830097 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 275
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 89, 36

Conread position: 457-838
Cow position: chr17:27865224-27865616 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 467-769
Cow position: chr17:3836428-3836735 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 26

Conread position: 485-769
Cow position: chr17:23783907-23783628 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 485-772
Cow position: chr17:22470346-22470060 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 490-645
Cow position: chr17:26656287-26656130 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 490-721
Cow position: chr17:21851335-21851106 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 26, 198

Conread position: 490-730
Cow position: chr17:3435099-3435335 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 55

Conread position: 490-768
Cow position: chr17:25503909-25504188 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 236, 35

Conread position: 492-838
Cow position: chr17:25544961-25545335 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 11

Conread position: 496-723
Cow position: chr17:21840074-21840298 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 31

Conread position: 499-768
Cow position: chr17:35251603-35251330 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 118

Conread position: 502-766
Cow position: chr17:9086292-9086559 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 115

Conread position: 503-755
Cow position: chr17:6202788-6203038 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 186, 33

Conread position: 503-835
Cow position: chr17:10639655-10640003 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 175, 213

Conread position: 503-835
Cow position: chr17:33985458-33985114 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 199

Conread position: 504-633
Cow position: chr17:8639624-8639752 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 504-769
Cow position: chr17:36038730-36038997 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 504-805
Cow position: chr17:21898341-21898646 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 506-841
Cow position: chr17:41715340-41715688 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 19

Conread position: 509-769
Cow position: chr17:8303579-8303833 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 6, 25

Conread position: 524-680
Cow position: chr17:24995443-24995286 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 524-763
Cow position: chr17:5414-5178 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 197, 15

Conread position: 524-838
Cow position: chr17:22463910-22463590 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 139

Conread position: 527-766
Cow position: chr17:16358599-16358839 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 9

Conread position: 529-697
Cow position: chr17:24586424-24586257 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 143, 0

Conread position: 529-769
Cow position: chr17:24004682-24004913 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 208, 23

Conread position: 530-776
Cow position: chr17:27593199-27593445 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 242

Conread position: 532-825
Cow position: chr17:45883584-45883884 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 165

Conread position: 533-724
Cow position: chr17:19004916-19004721 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 20

Conread position: 544-769
Cow position: chr17:2132076-2131851 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 206, 88

Conread position: 549-715
Cow position: chr17:24827146-24827310 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 132, 14

Conread position: 549-755
Cow position: chr17:17907168-17907372 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 549-838
Cow position: chr17:26653094-26652793 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 205, 126

Conread position: 552-838
Cow position: chr17:26654557-26654857 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 210, 174

Conread position: 554-755
Cow position: chr17:21905359-21905161 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 90, 13

Conread position: 557-725
Cow position: chr17:4187113-4187275 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 571-697
Cow position: chr17:37710705-37710831 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 574-769
Cow position: chr17:22835203-22835395 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 150, 64

Conread position: 578-838
Cow position: chr17:1101259-1101532 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 48

Conread position: 579-748
Cow position: chr17:10197627-10197459 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 0

Conread position: 584-839
Cow position: chr17:42585547-42585817 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 148, 90

Conread position: 590-838
Cow position: chr17:16353360-16353101 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 67, 189

Conread position: 612-835
Cow position: chr17:27713556-27713321 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 203

Conread position: 612-843
Cow position: chr17:7931283-7931527 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 22

Conread position: 614-838
Cow position: chr17:35265176-35264945 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 160, 32

Conread position: 639-838
Cow position: chr17:26655627-26655417 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 40

Show alignments to all cow chromosomes.