Cow genome map
Conread name: | Ss1.1-Pig4-TMW8062A10.5 |
Conread position: | 435-838 |
Cow position: | chr17:22808839-22808442 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 22 |
Conread position: | 457-680 |
Cow position: | chr17:1777018-1777233 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 169 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 21, 7 |
Conread position: | 457-684 |
Cow position: | chr17:4711-4490 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 158 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 457-838 |
Cow position: | chr17:3829701-3830097 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 275 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 89, 36 |
Conread position: | 457-838 |
Cow position: | chr17:27865224-27865616 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 7 |
Conread position: | 467-769 |
Cow position: | chr17:3836428-3836735 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 26 |
Conread position: | 485-769 |
Cow position: | chr17:23783907-23783628 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 485-772 |
Cow position: | chr17:22470346-22470060 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 46 |
Conread position: | 490-645 |
Cow position: | chr17:26656287-26656130 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 490-721 |
Cow position: | chr17:21851335-21851106 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 177 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 26, 198 |
Conread position: | 490-730 |
Cow position: | chr17:3435099-3435335 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 55 |
Conread position: | 490-768 |
Cow position: | chr17:25503909-25504188 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 207 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 236, 35 |
Conread position: | 492-838 |
Cow position: | chr17:25544961-25545335 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 266 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 23, 11 |
Conread position: | 496-723 |
Cow position: | chr17:21840074-21840298 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 22, 31 |
Conread position: | 499-768 |
Cow position: | chr17:35251603-35251330 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 118 |
Conread position: | 502-766 |
Cow position: | chr17:9086292-9086559 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 115 |
Conread position: | 503-755 |
Cow position: | chr17:6202788-6203038 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 190 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 186, 33 |
Conread position: | 503-835 |
Cow position: | chr17:10639655-10640003 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 242 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 175, 213 |
Conread position: | 503-835 |
Cow position: | chr17:33985458-33985114 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 245, 199 |
Conread position: | 504-633 |
Cow position: | chr17:8639624-8639752 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 504-769 |
Cow position: | chr17:36038730-36038997 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 504-805 |
Cow position: | chr17:21898341-21898646 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 0 |
Conread position: | 506-841 |
Cow position: | chr17:41715340-41715688 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 19 |
Conread position: | 509-769 |
Cow position: | chr17:8303579-8303833 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 199 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 6, 25 |
Conread position: | 524-680 |
Cow position: | chr17:24995443-24995286 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 126 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 524-763 |
Cow position: | chr17:5414-5178 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 178 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 197, 15 |
Conread position: | 524-838 |
Cow position: | chr17:22463910-22463590 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 139 |
Conread position: | 527-766 |
Cow position: | chr17:16358599-16358839 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 177 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 529-697 |
Cow position: | chr17:24586424-24586257 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 124 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 529-769 |
Cow position: | chr17:24004682-24004913 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 179 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 208, 23 |
Conread position: | 530-776 |
Cow position: | chr17:27593199-27593445 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 242 |
Conread position: | 532-825 |
Cow position: | chr17:45883584-45883884 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 214 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 23, 165 |
Conread position: | 533-724 |
Cow position: | chr17:19004916-19004721 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 150 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 11, 20 |
Conread position: | 544-769 |
Cow position: | chr17:2132076-2131851 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 168 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 206, 88 |
Conread position: | 549-715 |
Cow position: | chr17:24827146-24827310 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 134 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 132, 14 |
Conread position: | 549-755 |
Cow position: | chr17:17907168-17907372 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 147 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 549-838 |
Cow position: | chr17:26653094-26652793 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 218 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 205, 126 |
Conread position: | 552-838 |
Cow position: | chr17:26654557-26654857 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 218 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 210, 174 |
Conread position: | 554-755 |
Cow position: | chr17:21905359-21905161 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 154 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 90, 13 |
Conread position: | 557-725 |
Cow position: | chr17:4187113-4187275 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 571-697 |
Cow position: | chr17:37710705-37710831 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 574-769 |
Cow position: | chr17:22835203-22835395 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 151 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 150, 64 |
Conread position: | 578-838 |
Cow position: | chr17:1101259-1101532 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 48 |
Conread position: | 579-748 |
Cow position: | chr17:10197627-10197459 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 584-839 |
Cow position: | chr17:42585547-42585817 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 199 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 148, 90 |
Conread position: | 590-838 |
Cow position: | chr17:16353360-16353101 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 181 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 67, 189 |
Conread position: | 612-835 |
Cow position: | chr17:27713556-27713321 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 172 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 35, 203 |
Conread position: | 612-843 |
Cow position: | chr17:7931283-7931527 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 181 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 140, 22 |
Conread position: | 614-838 |
Cow position: | chr17:35265176-35264945 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 177 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 160, 32 |
Conread position: | 639-838 |
Cow position: | chr17:26655627-26655417 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 14, 40 |
Show alignments to all cow chromosomes.