Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A10.5

Conread position: 456-767
Cow position: chr19:11590202-11589894 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 8

Conread position: 456-806
Cow position: chr19:53634193-53634540 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 8

Conread position: 469-679
Cow position: chr19:11417426-11417628 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 25

Conread position: 473-688
Cow position: chr19:28339724-28339939 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 62, 198

Conread position: 474-670
Cow position: chr19:9431742-9431553 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 113

Conread position: 480-767
Cow position: chr19:44338915-44339198 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 200, 45

Conread position: 480-838
Cow position: chr19:15972226-15971856 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 13

Conread position: 485-770
Cow position: chr19:51647637-51647347 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 490-700
Cow position: chr19:25131-25340 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 104

Conread position: 491-767
Cow position: chr19:11784444-11784160 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 63

Conread position: 492-830
Cow position: chr19:7384999-7384650 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 228
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 177

Conread position: 501-678
Cow position: chr19:53629982-53629806 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 52

Conread position: 503-769
Cow position: chr19:11076617-11076351 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 69

Conread position: 504-680
Cow position: chr19:4519866-4520044 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 112

Conread position: 504-754
Cow position: chr19:37778290-37778526 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 0

Conread position: 504-755
Cow position: chr19:20609877-20609629 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 505-838
Cow position: chr19:11973635-11973286 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 529-666
Cow position: chr19:47325799-47325663 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 529-754
Cow position: chr19:22428933-22429161 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 529-773
Cow position: chr19:11079086-11079331 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 23

Conread position: 529-838
Cow position: chr19:28448040-28448370 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 158, 84

Conread position: 533-834
Cow position: chr19:28610442-28610140 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 220, 19

Conread position: 548-701
Cow position: chr19:55149765-55149916 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 51

Conread position: 548-841
Cow position: chr19:43551297-43550983 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 8

Conread position: 549-838
Cow position: chr19:34927293-34927572 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 249, 109

Conread position: 552-755
Cow position: chr19:11433399-11433202 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 167, 11

Conread position: 552-759
Cow position: chr19:33160914-33161107 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 552-774
Cow position: chr19:51064030-51064246 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 78

Conread position: 555-754
Cow position: chr19:53012379-53012568 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 53, 66

Conread position: 559-753
Cow position: chr19:33287363-33287171 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 137, 0

Conread position: 562-834
Cow position: chr19:21017006-21017294 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 154, 102

Conread position: 565-774
Cow position: chr19:54159764-54159968 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 188, 45

Conread position: 571-838
Cow position: chr19:6541758-6542043 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 156, 28

Conread position: 574-834
Cow position: chr19:9903693-9903974 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 150, 260

Conread position: 586-774
Cow position: chr19:20607866-20608054 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 146, 86

Conread position: 590-838
Cow position: chr19:14424913-14424652 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 147, 228

Conread position: 605-715
Cow position: chr19:6762966-6763073 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 75

Conread position: 605-852
Cow position: chr19:46849983-46850238 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 207

Conread position: 620-754
Cow position: chr19:51359782-51359916 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 630-850
Cow position: chr19:24047270-24047036 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 188

Conread position: 633-838
Cow position: chr19:36592870-36592650 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 123, 63

Show alignments to all cow chromosomes.