Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               457-636
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               457-838
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 7
               

               Conread position:
               458-841
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               459-661
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 5
               

               Conread position:
               465-773
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               58, 94
               

               Conread position:
               466-647
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               475-774
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               476-730
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               480-747
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               480-838
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               480-842
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 5
               

               Conread position:
               485-721
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               486-763
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               490-643
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               490-676
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               33, 157
               

               Conread position:
               490-705
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               490-724
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 35
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 274
               

               Conread position:
               491-838
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 34
               

               Conread position:
               492-660
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               492-730
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               492-767
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               492-768
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               493-834
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 33
               

               Conread position:
               494-724
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               6, 53
               

               Conread position:
               503-684
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-702
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               503-773
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               503-834
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 15
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 152
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 128
               

               Conread position:
               504-754
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               504-769
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 165
               

               Conread position:
               504-774
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               506-720
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               509-828
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               509-834
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 76
               

               Conread position:
               510-767
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               513-838
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 159
               

               Conread position:
               514-776
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               144, 15
               

               Conread position:
               521-724
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               524-712
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               174, 131
               

               Conread position:
               524-828
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 180
               

               Conread position:
               526-838
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 29
               

               Conread position:
               529-768
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               530-838
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 185
               

               Conread position:
               537-684
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               538-717
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               539-769
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               5, 191
               

               Conread position:
               541-725
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               545-838
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 164
               

               Conread position:
               549-760
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               192, 9
               

               Conread position:
               549-769
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               111, 170
               

               Conread position:
               549-838
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               208, 14
               

               Conread position:
               552-839
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               555-755
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               162, 8
               

               Conread position:
               557-838
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               558-825
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               159, 14
               

               Conread position:
               559-764
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               11, 114
               

               Conread position:
               563-774
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               154, 27
               

               Conread position:
               570-698
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-707
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-746
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               579-769
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               582-754
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               599-769
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               128, 23
               

               Conread position:
               613-838
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 187
               

               Conread position:
               629-769
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               631-838
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               633-838
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               640-828
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               644-838
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 0
               
Show alignments to all cow chromosomes.