Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A10.5

Conread position: 433-838
Cow position:
Alignm length: 435
Alignm identity: 284
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 28, 41

Conread position: 448-765
Cow position:
Alignm length: 320
Alignm identity: 220
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 293, 16

Conread position: 457-750
Cow position:
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 7

Conread position: 467-767
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 194

Conread position: 469-754
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 86, 20

Conread position: 477-764
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 250, 75

Conread position: 479-838
Cow position:
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 14

Conread position: 483-838
Cow position:
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 58

Conread position: 485-838
Cow position:
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 100

Conread position: 490-772
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 27

Conread position: 490-834
Cow position:
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 28

Conread position: 491-838
Cow position:
Alignm length: 370
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 195, 27

Conread position: 502-769
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 503-641
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 503-755
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 49, 0

Conread position: 503-769
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 69

Conread position: 503-838
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 12, 27

Conread position: 504-663
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 11, 26

Conread position: 505-635
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 40

Conread position: 507-834
Cow position:
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 10

Conread position: 509-753
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 6, 21

Conread position: 509-838
Cow position:
Alignm length: 351
Alignm identity: 249
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 6, 21

Conread position: 510-756
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 28, 0

Conread position: 510-765
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 32, 80

Conread position: 515-838
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 134

Conread position: 524-772
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 61, 7

Conread position: 527-769
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 233, 28

Conread position: 529-744
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 149, 174

Conread position: 529-835
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 21

Conread position: 529-838
Cow position:
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 73

Conread position: 530-748
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 147, 0

Conread position: 532-754
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 165

Conread position: 533-759
Cow position:
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 536-699
Cow position:
Alignm length: 164
Alignm identity: 133
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 119, 0

Conread position: 542-754
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 115

Conread position: 552-774
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 164, 11

Conread position: 555-774
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 65

Conread position: 562-721
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 569-767
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 11, 135

Conread position: 577-822
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 150, 78

Conread position: 580-761
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 65, 110

Conread position: 583-774
Cow position:
Alignm length: 194
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 583-834
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 170, 23

Conread position: 584-835
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 169, 90

Conread position: 586-841
Cow position:
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 603-754
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 93

Conread position: 647-760
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.