Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               457-671
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               457-774
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               457-838
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               457-838
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               131, 7
               

               Conread position:
               457-838
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               457-851
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 18
               

               Conread position:
               471-716
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               474-769
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               477-691
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               477-835
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               478-769
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 22
               

               Conread position:
               479-838
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               230, 14
               

               Conread position:
               479-838
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 14
               

               Conread position:
               479-838
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               480-838
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               483-774
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 163
               

               Conread position:
               490-715
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               491-633
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               491-769
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 34
               

               Conread position:
               492-721
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               492-769
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 10
               

               Conread position:
               499-769
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 79
               

               Conread position:
               502-730
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               138, 27
               

               Conread position:
               503-680
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               503-761
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 0
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 32
               

               Conread position:
               503-773
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               251, 86
               

               Conread position:
               503-774
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               192, 43
               

               Conread position:
               503-819
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 72
               

               Conread position:
               504-754
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               504-774
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               505-756
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               505-756
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               505-769
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               505-838
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               506-647
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               506-769
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               172, 139
               

               Conread position:
               509-825
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               6, 44
               

               Conread position:
               520-769
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 32
               

               Conread position:
               522-636
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               524-754
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               524-767
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               188, 128
               

               Conread position:
               524-848
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               525-838
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               526-769
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               531-702
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               531-755
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               532-671
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               532-769
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               533-721
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               16, 179
               

               Conread position:
               533-835
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               243, 31
               

               Conread position:
               533-838
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               539-754
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               5, 191
               

               Conread position:
               541-838
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               166, 27
               

               Conread position:
               546-770
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               173, 117
               

               Conread position:
               547-768
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               187, 58
               

               Conread position:
               548-753
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               75, 149
               

               Conread position:
               554-751
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               554-830
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               176, 79
               

               Conread position:
               555-754
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               574-774
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               578-730
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               132
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               97, 139
               

               Conread position:
               578-838
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               139, 55
               

               Conread position:
               579-830
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 55
               

               Conread position:
               579-835
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               153, 7
               

               Conread position:
               581-769
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               584-769
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 89
               

               Conread position:
               584-838
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               588-763
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               601-768
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               604-766
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               613-838
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               137, 73
               

               Conread position:
               627-838
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               628-754
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 105
               
Show alignments to all cow chromosomes.