Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8062A10.5 |
| Conread position: | 384-835 |
| Cow position: | chr22:894496-894028 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 441-772 |
| Cow position: | chr22:15682279-15682622 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 459-770 |
| Cow position: | chr22:7211275-7210977 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 5 |
| Conread position: | 466-764 |
| Cow position: | chr22:20078171-20077871 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 296 |
| Conread position: | 474-670 |
| Cow position: | chr22:3467129-3467321 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 6, 73 |
| Conread position: | 479-769 |
| Cow position: | chr22:14447599-14447312 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 484-838 |
| Cow position: | chr22:35460263-35459895 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 7 |
| Conread position: | 488-838 |
| Cow position: | chr22:2013427-2013794 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 37 |
| Conread position: | 490-822 |
| Cow position: | chr22:13513434-13513092 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 490-834 |
| Cow position: | chr22:3044833-3045171 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 184, 37 |
| Conread position: | 491-723 |
| Cow position: | chr22:40281926-40281700 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 496-769 |
| Cow position: | chr22:39648315-39648584 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 177 |
| Conread position: | 499-676 |
| Cow position: | chr22:41957863-41957687 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 500-830 |
| Cow position: | chr22:23071359-23071036 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 252 |
| Conread position: | 503-717 |
| Cow position: | chr22:23086269-23086479 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 212, 152 |
| Conread position: | 503-753 |
| Cow position: | chr22:6439007-6438759 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 503-838 |
| Cow position: | chr22:6930617-6930267 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 141 |
| Conread position: | 504-746 |
| Cow position: | chr22:25588255-25588017 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 172, 151 |
| Conread position: | 504-841 |
| Cow position: | chr22:14238532-14238198 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 505-769 |
| Cow position: | chr22:2112163-2112427 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 506-841 |
| Cow position: | chr22:35892998-35892650 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 509-769 |
| Cow position: | chr22:45978234-45978502 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 510-838 |
| Cow position: | chr22:21165016-21164671 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 514-663 |
| Cow position: | chr22:21169848-21169700 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 524-838 |
| Cow position: | chr22:6238928-6238608 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 28 |
| Conread position: | 529-725 |
| Cow position: | chr22:17375000-17374808 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 529-838 |
| Cow position: | chr22:14244480-14244169 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 530-769 |
| Cow position: | chr22:15672275-15672515 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 535-763 |
| Cow position: | chr22:32038400-32038169 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 97 |
| Conread position: | 543-838 |
| Cow position: | chr22:32126709-32126400 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 5, 201 |
| Conread position: | 546-752 |
| Cow position: | chr22:12861310-12861112 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 549-769 |
| Cow position: | chr22:35886947-35886725 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 206, 73 |
| Conread position: | 557-838 |
| Cow position: | chr22:39617928-39618213 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 61 |
| Conread position: | 562-848 |
| Cow position: | chr22:37783097-37783402 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 564-841 |
| Cow position: | chr22:6439477-6439179 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 566-691 |
| Cow position: | chr22:29193293-29193168 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-769 |
| Cow position: | chr22:23072514-23072329 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 177, 60 |
| Conread position: | 615-749 |
| Cow position: | chr22:22242430-22242566 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 619-838 |
| Cow position: | chr22:1474045-1474270 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 630-755 |
| Cow position: | chr22:21021086-21021211 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 97 |
| Conread position: | 693-838 |
| Cow position: | chr22:45073989-45073840 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 126 |
Show alignments to all cow chromosomes.