Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A10.5

Conread position: 459-635
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 64

Conread position: 477-838
Cow position:
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 24

Conread position: 479-715
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 36, 14

Conread position: 479-753
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 15

Conread position: 479-754
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 14

Conread position: 479-769
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 480-744
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 45

Conread position: 487-724
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 7

Conread position: 499-769
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 43, 30

Conread position: 499-838
Cow position:
Alignm length: 361
Alignm identity: 256
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 56

Conread position: 502-725
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 87

Conread position: 503-754
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 131

Conread position: 503-838
Cow position:
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 71

Conread position: 503-838
Cow position:
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 27

Conread position: 504-675
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 50

Conread position: 504-844
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 35

Conread position: 511-763
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 521-828
Cow position:
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 31

Conread position: 527-754
Cow position:
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 108

Conread position: 527-838
Cow position:
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 25

Conread position: 529-774
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 247

Conread position: 530-838
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 532-838
Cow position:
Alignm length: 323
Alignm identity: 227
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 218, 39

Conread position: 545-822
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 110

Conread position: 547-719
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 549-748
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 168, 114

Conread position: 549-753
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 549-825
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 132

Conread position: 552-681
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 554-838
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 30

Conread position: 554-840
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 555-698
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 557-774
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 157, 116

Conread position: 562-768
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 8, 41

Conread position: 562-825
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 193, 164

Conread position: 566-770
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 74, 90

Conread position: 566-806
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 161, 104

Conread position: 570-838
Cow position:
Alignm length: 286
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 175, 68

Conread position: 574-765
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 176, 93

Conread position: 593-754
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 611-757
Cow position:
Alignm length: 147
Alignm identity: 122
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 668-767
Cow position:
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.