Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8062A10.5 |
| Conread position: | 414-838 |
| Cow position: | chr26:31833264-31832821 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 477-838 |
| Cow position: | chr26:1068353-1068717 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 278, 204 |
| Conread position: | 503-768 |
| Cow position: | chr26:22253570-22253836 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 503-774 |
| Cow position: | chr26:5314012-5314277 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 503-786 |
| Cow position: | chr26:11758988-11758705 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 169, 79 |
| Conread position: | 503-838 |
| Cow position: | chr26:22844416-22844758 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 503-838 |
| Cow position: | chr26:31845015-31844666 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 316 |
| Conread position: | 503-844 |
| Cow position: | chr26:409677-409321 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 49 |
| Conread position: | 504-671 |
| Cow position: | chr26:7317095-7316924 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 504-834 |
| Cow position: | chr26:18373333-18372988 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 220 |
| Conread position: | 521-838 |
| Cow position: | chr26:25303115-25303444 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 166 |
| Conread position: | 526-773 |
| Cow position: | chr26:864810-864570 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 529-769 |
| Cow position: | chr26:32073680-32073440 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 116, 91 |
| Conread position: | 531-769 |
| Cow position: | chr26:30401449-30401689 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 545-724 |
| Cow position: | chr26:758461-758280 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 129, 166 |
| Conread position: | 554-774 |
| Cow position: | chr26:31536904-31537123 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 89 |
| Conread position: | 555-768 |
| Cow position: | chr26:34317658-34317862 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 555-838 |
| Cow position: | chr26:9239582-9239301 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 164, 108 |
| Conread position: | 559-769 |
| Cow position: | chr26:8521878-8521667 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 568-724 |
| Cow position: | chr26:34990329-34990181 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 154, 75 |
| Conread position: | 570-702 |
| Cow position: | chr26:29382167-29382299 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 571-754 |
| Cow position: | chr26:26653468-26653657 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 118, 160 |
| Conread position: | 579-769 |
| Cow position: | chr26:10985202-10985002 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 579-773 |
| Cow position: | chr26:6464992-6464797 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 585-841 |
| Cow position: | chr26:18207906-18208178 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 89, 148 |
| Conread position: | 638-767 |
| Cow position: | chr26:27937456-27937587 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 638-834 |
| Cow position: | chr26:5835229-5835020 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 0 |
Show alignments to all cow chromosomes.