Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8062A10.5 |
| Conread position: | 444-839 |
| Cow position: | chr28:9715132-9715529 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 466-838 |
| Cow position: | chr28:19219710-19220105 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 467-773 |
| Cow position: | chr28:30126568-30126873 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 6 |
| Conread position: | 480-828 |
| Cow position: | chr28:33201252-33200885 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 490-769 |
| Cow position: | chr28:5933076-5933342 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 235, 11 |
| Conread position: | 490-834 |
| Cow position: | chr28:7340687-7340340 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 492-838 |
| Cow position: | chr28:5703439-5703092 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 492-838 |
| Cow position: | chr28:26920671-26920321 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 502-838 |
| Cow position: | chr28:2051972-2052320 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 503-745 |
| Cow position: | chr28:34847148-34846908 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 506-834 |
| Cow position: | chr28:33064382-33064724 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 129, 19 |
| Conread position: | 525-838 |
| Cow position: | chr28:6952025-6951706 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 64 |
| Conread position: | 529-752 |
| Cow position: | chr28:29042407-29042185 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 7 |
| Conread position: | 539-769 |
| Cow position: | chr28:25581171-25581402 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 547-715 |
| Cow position: | chr28:29048500-29048333 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 142 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 549-702 |
| Cow position: | chr28:28148148-28148301 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 549-745 |
| Cow position: | chr28:34651897-34652086 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 168, 114 |
| Conread position: | 559-719 |
| Cow position: | chr28:19381201-19381041 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 115 |
| Conread position: | 571-769 |
| Cow position: | chr28:26251967-26251771 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 114 |
| Conread position: | 579-835 |
| Cow position: | chr28:22805659-22805926 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 583-688 |
| Cow position: | chr28:8904091-8904196 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 584-769 |
| Cow position: | chr28:5345590-5345405 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 169, 24 |
| Conread position: | 586-835 |
| Cow position: | chr28:15518022-15517757 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 631-838 |
| Cow position: | chr28:4134724-4134930 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 650-838 |
| Cow position: | chr28:10570160-10569958 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.