Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               409-838
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               454-682
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               456-773
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               457-769
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               468-753
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 25
               

               Conread position:
               471-678
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               473-675
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               476-764
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               477-834
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 68
               

               Conread position:
               478-834
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               85, 11
               

               Conread position:
               479-700
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               185, 14
               

               Conread position:
               489-774
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 35
               

               Conread position:
               490-702
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               28, 36
               

               Conread position:
               490-830
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               490-836
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               132, 45
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               491-838
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 186
               

               Conread position:
               492-710
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               492-770
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 44
               

               Conread position:
               492-838
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               493-838
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               168, 130
               

               Conread position:
               503-752
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               41, 29
               

               Conread position:
               503-752
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               41, 29
               

               Conread position:
               503-754
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               503-761
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               203, 33
               

               Conread position:
               503-768
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               503-807
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               245, 133
               

               Conread position:
               503-841
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               504-708
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               151, 78
               

               Conread position:
               504-724
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               504-769
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               191, 32
               

               Conread position:
               505-745
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               509-835
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 27
               

               Conread position:
               511-767
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               203, 7
               

               Conread position:
               514-685
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               521-656
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               529-680
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               529-767
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               529-768
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               221, 7
               

               Conread position:
               529-842
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               145, 92
               

               Conread position:
               531-769
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               532-769
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               532-769
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               533-838
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               184, 130
               

               Conread position:
               547-740
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               44, 108
               

               Conread position:
               549-769
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               550-701
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-710
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               552-769
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               125, 28
               

               Conread position:
               555-838
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               113, 139
               

               Conread position:
               557-748
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               565-746
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 98
               

               Conread position:
               570-838
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               572-753
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 41
               

               Conread position:
               574-769
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               190, 81
               

               Conread position:
               577-834
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               582-673
               

               Cow position:
               
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               603-769
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               606-838
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               144, 87
               

               Conread position:
               609-739
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               621-754
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               631-838
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 22
               
Show alignments to all cow chromosomes.