Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               417-822
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               290
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               45, 36
               

               Conread position:
               456-682
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               456-838
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 19
               

               Conread position:
               457-769
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               457-836
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               465-794
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               50, 121
               

               Conread position:
               466-769
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               466-830
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 271
               

               Conread position:
               467-759
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               467-776
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               232, 26
               

               Conread position:
               477-727
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               478-838
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               480-686
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               480-764
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 96
               

               Conread position:
               482-835
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 219
               

               Conread position:
               485-671
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               123, 148
               

               Conread position:
               489-718
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               490-655
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               490-702
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               490-725
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               490-845
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 124
               

               Conread position:
               491-838
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               497-769
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               499-676
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               500-838
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 18
               

               Conread position:
               503-718
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 162
               

               Conread position:
               504-702
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               504-841
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               514-818
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               23, 149
               

               Conread position:
               524-805
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 106
               

               Conread position:
               525-825
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 173
               

               Conread position:
               526-774
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 170
               

               Conread position:
               529-748
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 57
               

               Conread position:
               529-838
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 184
               

               Conread position:
               530-838
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               531-765
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 64
               

               Conread position:
               532-755
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               532-768
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               154, 184
               

               Conread position:
               533-838
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               141, 110
               

               Conread position:
               539-706
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               542-710
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               544-841
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 31
               

               Conread position:
               546-838
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 127
               

               Conread position:
               549-754
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               552-769
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               552-825
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               167, 183
               

               Conread position:
               554-685
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-767
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               120, 108
               

               Conread position:
               555-754
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               555-755
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               85, 147
               

               Conread position:
               557-721
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               557-724
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               557-769
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               564-769
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               163, 42
               

               Conread position:
               564-791
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               565-725
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               151, 117
               

               Conread position:
               570-838
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               572-754
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               108, 155
               

               Conread position:
               579-699
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               582-838
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               582-838
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               170, 29
               

               Conread position:
               583-769
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               146, 116
               

               Conread position:
               587-786
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               130, 76
               

               Conread position:
               593-767
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               594-719
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               612-769
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               623-834
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               104, 37
               

               Conread position:
               631-724
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               634-769
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               638-838
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               639-769
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               663-828
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               665-838
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 0
               
Show alignments to all cow chromosomes.