Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               443-668
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               456-773
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               457-724
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               457-838
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               462-773
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               91, 5
               

               Conread position:
               466-834
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               466-838
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 67
               

               Conread position:
               469-744
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 71
               

               Conread position:
               473-767
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               246, 190
               

               Conread position:
               475-636
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               45, 18
               

               Conread position:
               477-769
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 75
               

               Conread position:
               479-834
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               479-834
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               479-834
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               480-749
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               24, 225
               

               Conread position:
               480-765
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 228
               

               Conread position:
               482-838
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               483-837
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               485-721
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               56, 61
               

               Conread position:
               489-730
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 218
               

               Conread position:
               490-671
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               490-706
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 141
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               491-794
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               46, 133
               

               Conread position:
               491-838
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 15
               

               Conread position:
               493-719
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               493-838
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               496-767
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               29, 179
               

               Conread position:
               499-835
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               232, 31
               

               Conread position:
               499-838
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 0
               

               Conread position:
               502-706
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               54, 183
               

               Conread position:
               503-756
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               503-774
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               199, 15
               

               Conread position:
               504-828
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               504-834
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               505-769
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               524-838
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 301
               

               Conread position:
               527-797
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               207, 57
               

               Conread position:
               529-676
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               529-690
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               529-754
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 196
               

               Conread position:
               529-754
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               530-679
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               530-838
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 142
               

               Conread position:
               531-774
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               532-769
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               537-763
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               148, 108
               

               Conread position:
               539-774
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               543-754
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               5, 19
               

               Conread position:
               544-825
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               173, 73
               

               Conread position:
               545-769
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               31, 138
               

               Conread position:
               548-771
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               552-838
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               552-838
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               167, 11
               

               Conread position:
               554-767
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               555-763
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               123, 76
               

               Conread position:
               555-838
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 193
               

               Conread position:
               556-719
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-744
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               562-838
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               167, 33
               

               Conread position:
               563-838
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               154, 109
               

               Conread position:
               568-769
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               159, 103
               

               Conread position:
               570-774
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               574-763
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 144
               

               Conread position:
               574-763
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               127, 53
               

               Conread position:
               578-748
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               582-840
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               132, 74
               

               Conread position:
               590-767
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               151
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               590-838
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               177, 83
               

               Conread position:
               591-826
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               157, 109
               

               Conread position:
               632-828
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               638-828
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 42
               

               Conread position:
               663-769
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               68, 0
               
Show alignments to all cow chromosomes.