Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               416-636
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 127
               

               Conread position:
               444-838
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               457-774
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 7
               

               Conread position:
               466-838
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 242
               

               Conread position:
               467-662
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               467-748
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 26
               

               Conread position:
               468-767
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               473-721
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               479-680
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               479-838
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               23, 15
               

               Conread position:
               480-725
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               482-670
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               484-767
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               485-737
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               188, 67
               

               Conread position:
               485-769
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 183
               

               Conread position:
               490-680
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               490-725
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 52
               

               Conread position:
               490-769
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               226, 58
               

               Conread position:
               490-835
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               492-765
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 193
               

               Conread position:
               492-769
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 10
               

               Conread position:
               492-838
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               67, 11
               

               Conread position:
               492-841
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               492-842
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               494-834
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               234, 69
               

               Conread position:
               499-702
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               499-838
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               106, 156
               

               Conread position:
               501-838
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 28
               

               Conread position:
               502-724
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               503-688
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               503-756
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               503-768
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 152
               

               Conread position:
               503-828
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               172, 160
               

               Conread position:
               504-754
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 80
               

               Conread position:
               504-774
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               505-702
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               505-834
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               505-851
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               509-763
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               218, 11
               

               Conread position:
               524-710
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 5
               

               Conread position:
               529-774
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               529-774
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 145
               

               Conread position:
               529-838
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               532-724
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               140, 20
               

               Conread position:
               538-838
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               539-753
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               5, 190
               

               Conread position:
               540-671
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               540-774
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               180, 5
               

               Conread position:
               545-754
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               10, 131
               

               Conread position:
               547-828
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               549-761
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               549-769
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               552-666
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               552-668
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               552-773
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               552-774
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               129, 11
               

               Conread position:
               555-745
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               170, 108
               

               Conread position:
               555-748
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-774
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               202, 67
               

               Conread position:
               555-774
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               555-774
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               557-705
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               558-773
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               559-769
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 118
               

               Conread position:
               562-754
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               563-764
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               117, 17
               

               Conread position:
               571-838
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 152
               

               Conread position:
               578-711
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               578-750
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               149, 65
               

               Conread position:
               579-732
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               585-770
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               147, 46
               

               Conread position:
               588-703
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               594-838
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               101, 141
               

               Conread position:
               630-769
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               631-838
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               662-835
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               55, 71
               
Show alignments to all cow chromosomes.