Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               433-769
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               456-767
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               456-838
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 8
               

               Conread position:
               457-748
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               464-842
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               467-767
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 26
               

               Conread position:
               467-834
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               467-838
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               470-769
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               8, 190
               

               Conread position:
               473-721
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               125, 200
               

               Conread position:
               480-702
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 49
               

               Conread position:
               483-834
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               490-699
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 167
               

               Conread position:
               490-770
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 173
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 336
               

               Conread position:
               491-671
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               491-835
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               492-765
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               45, 172
               

               Conread position:
               499-769
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 83
               

               Conread position:
               502-825
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               503-688
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               503-769
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               171, 24
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               199, 133
               

               Conread position:
               503-838
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 139
               

               Conread position:
               504-753
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               504-838
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               51, 29
               

               Conread position:
               511-768
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               524-779
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 157
               

               Conread position:
               524-834
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               527-769
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               528-834
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 69
               

               Conread position:
               529-769
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 188
               

               Conread position:
               529-769
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               225, 89
               

               Conread position:
               529-773
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               529-786
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 165
               

               Conread position:
               532-740
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               532-828
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               23, 82
               

               Conread position:
               536-754
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               539-744
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               5, 146
               

               Conread position:
               539-745
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               5, 98
               

               Conread position:
               539-835
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               547-756
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               180, 116
               

               Conread position:
               547-787
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               549-682
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               549-774
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               170, 13
               

               Conread position:
               552-763
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 205
               

               Conread position:
               552-768
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               128, 10
               

               Conread position:
               554-852
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               557-767
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               196, 101
               

               Conread position:
               562-697
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               12, 76
               

               Conread position:
               571-728
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               578-769
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               580-680
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               585-767
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               131, 100
               

               Conread position:
               599-773
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               120, 73
               

               Conread position:
               600-754
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               634-765
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               69, 0
               
Show alignments to all cow chromosomes.