Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               197-838
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 493
               

               Conread position:
               456-838
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               467-751
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               201, 26
               

               Conread position:
               467-834
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               11, 59
               

               Conread position:
               467-838
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               473-721
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               479-769
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               479-838
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 14
               

               Conread position:
               485-765
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               33, 41
               

               Conread position:
               490-636
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               490-730
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               47, 222
               

               Conread position:
               490-772
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               182, 120
               

               Conread position:
               491-729
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               158, 38
               

               Conread position:
               491-834
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               492-763
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 130
               

               Conread position:
               492-768
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               495-838
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               499-721
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               218, 181
               

               Conread position:
               502-834
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 23
               

               Conread position:
               524-838
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 175
               

               Conread position:
               526-830
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 67
               

               Conread position:
               526-838
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               532-718
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               532-718
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               532-838
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               532-841
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 20
               

               Conread position:
               535-774
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 33
               

               Conread position:
               545-835
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               42, 9
               

               Conread position:
               545-838
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               547-759
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               549-767
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               170, 69
               

               Conread position:
               554-822
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               97, 35
               

               Conread position:
               554-838
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               196, 67
               

               Conread position:
               555-760
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-774
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               162, 108
               

               Conread position:
               555-774
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               555-838
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 59
               

               Conread position:
               555-838
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               198, 100
               

               Conread position:
               574-838
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 122
               

               Conread position:
               578-767
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               579-770
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               182, 157
               

               Conread position:
               583-828
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               170, 113
               

               Conread position:
               586-749
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 112
               

               Conread position:
               590-822
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               110, 82
               

               Conread position:
               594-767
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               99, 116
               

               Conread position:
               605-769
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               610-782
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 53
               

               Conread position:
               612-838
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               137, 194
               

               Conread position:
               627-838
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 170
               

               Conread position:
               638-774
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               650-825
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               669-846
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               693-838
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               39, 29
               
Show alignments to all cow chromosomes.