Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A10.5
        

               Conread position:
               457-650
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 7
               

               Conread position:
               466-729
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               467-838
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               470-766
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               477-769
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 75
               

               Conread position:
               479-728
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               480-725
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 202
               

               Conread position:
               480-832
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               38, 48
               

               Conread position:
               480-838
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 324
               

               Conread position:
               485-763
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               490-636
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               490-766
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               241, 145
               

               Conread position:
               490-769
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               28, 185
               

               Conread position:
               490-838
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 38
               

               Conread position:
               491-838
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 78
               

               Conread position:
               491-838
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               57, 11
               

               Conread position:
               492-641
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               492-838
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               493-635
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               499-839
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 26
               

               Conread position:
               501-834
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 251
               

               Conread position:
               503-725
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               503-768
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 66
               

               Conread position:
               504-748
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               504-769
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 221
               

               Conread position:
               504-822
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               510-763
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               510-838
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               513-701
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               127, 25
               

               Conread position:
               524-724
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               149, 33
               

               Conread position:
               527-838
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               529-746
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               529-753
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               529-761
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               529-769
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               203, 144
               

               Conread position:
               529-838
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 164
               

               Conread position:
               541-756
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               209, 177
               

               Conread position:
               544-838
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               206, 118
               

               Conread position:
               549-751
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               116, 150
               

               Conread position:
               549-774
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               168, 106
               

               Conread position:
               552-724
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               552-761
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               177, 103
               

               Conread position:
               552-774
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-680
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               556-769
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               160, 122
               

               Conread position:
               557-676
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               557-775
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               145, 75
               

               Conread position:
               571-838
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               136, 35
               

               Conread position:
               572-769
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               145, 72
               

               Conread position:
               573-780
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               155, 58
               

               Conread position:
               579-841
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               147, 76
               

               Conread position:
               580-768
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               603-838
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 65
               

               Conread position:
               616-830
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               111, 6
               

               Conread position:
               624-768
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               625-754
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 71
               

               Conread position:
               627-838
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               123, 193
               

               Conread position:
               638-838
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               641-760
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               693-838
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
               
Show alignments to all cow chromosomes.