Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A12.3

Conread position: 1-157
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 107, 84

Conread position: 1-163
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1-163
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 34

Conread position: 1-165
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 145

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-193
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 102, 83

Conread position: 2-163
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 115

Conread position: 2-164
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 103, 30

Conread position: 2-165
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 106, 114

Conread position: 3-163
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 109, 96

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 3-194
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 4-147
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 4-165
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-165
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 95

Conread position: 4-165
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 4-165
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 4-165
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 4-165
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 69

Conread position: 4-165
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 156

Conread position: 4-166
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 68

Conread position: 4-184
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 175

Conread position: 4-185
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 95

Conread position: 4-189
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 108

Conread position: 4-193
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 163, 117

Conread position: 5-163
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 5-163
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 106, 94

Conread position: 5-163
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 5-163
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 94

Conread position: 5-163
Cow position:
Alignm length: 160
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 30

Conread position: 5-164
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 5-165
Cow position:
Alignm length: 161
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-182
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 161, 91

Conread position: 5-191
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 169

Conread position: 5-214
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 162, 95

Conread position: 6-150
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 99, 65

Conread position: 6-165
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 93

Conread position: 7-128
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 7-138
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 110

Conread position: 7-144
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 109

Conread position: 7-147
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 7-148
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 7-150
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 99, 7

Conread position: 7-157
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 7-157
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 7-157
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 7-158
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 7-158
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 23

Conread position: 7-162
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 110

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 7-163
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 41

Conread position: 7-163
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 28

Conread position: 7-163
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 106, 47

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 26, 90

Conread position: 7-163
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 7-163
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 32

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 111, 78

Conread position: 7-163
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 94

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 7-163
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 59

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 112, 92

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 7-163
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 28

Conread position: 7-164
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 32

Conread position: 7-164
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 92

Conread position: 7-165
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 29

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 7-165
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 142

Conread position: 7-165
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 7-165
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 7-165
Cow position:
Alignm length: 162
Alignm identity: 133
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 99, 111

Conread position: 7-165
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 55

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 7-165
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 43

Conread position: 7-168
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 96

Conread position: 7-174
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 7-186
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 7-186
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 134

Conread position: 7-187
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 7-191
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 7-191
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 99, 25

Conread position: 7-191
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 98, 47

Conread position: 7-191
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 7-191
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 14

Conread position: 7-194
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 7-204
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 45

Conread position: 8-151
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 8-165
Cow position:
Alignm length: 158
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 8-186
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 154, 90

Conread position: 9-159
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 9-163
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 108

Conread position: 9-163
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 9-164
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 9-165
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 9-166
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 92

Conread position: 9-191
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 145

Conread position: 10-163
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 24

Conread position: 10-165
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 36

Conread position: 10-186
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 11-193
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 88

Conread position: 12-165
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 87

Conread position: 13-161
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 15-163
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 101

Show alignments to all cow chromosomes.