Cow genome map
Conread name: | Ss1.1-Pig4-TMW8062A12.3 |
Conread position: | 1-163 |
Cow position: | chr18:33896379-33896551 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 134 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-165 |
Cow position: | chr18:9365960-9365793 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 121 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 52, 118 |
Conread position: | 1-165 |
Cow position: | chr18:11691370-11691531 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 130 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 104, 22 |
Conread position: | 1-165 |
Cow position: | chr18:20126344-20126182 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 97, 25 |
Conread position: | 1-165 |
Cow position: | chr18:29058463-29058617 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 1-165 |
Cow position: | chr18:42432050-42432217 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 2-163 |
Cow position: | chr18:55505442-55505286 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 2-165 |
Cow position: | chr18:39875221-39875382 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 106, 79 |
Conread position: | 3-164 |
Cow position: | chr18:1954552-1954712 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 152, 137 |
Conread position: | 3-165 |
Cow position: | chr18:43950863-43950700 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 117 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 4-163 |
Cow position: | chr18:55461670-55461829 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 113 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-165 |
Cow position: | chr18:19688060-19687897 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 121 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 4-165 |
Cow position: | chr18:23623597-23623756 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 117 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 4-190 |
Cow position: | chr18:36746223-36746406 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 136 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 156, 95 |
Conread position: | 4-193 |
Cow position: | chr18:17649702-17649894 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 134 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 69, 88 |
Conread position: | 4-193 |
Cow position: | chr18:52703810-52704006 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 142 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 5-137 |
Cow position: | chr18:32189472-32189607 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 5-157 |
Cow position: | chr18:10576146-10575987 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 5-159 |
Cow position: | chr18:42479551-42479705 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-163 |
Cow position: | chr18:6310116-6309960 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 86, 27 |
Conread position: | 5-163 |
Cow position: | chr18:33008101-33007939 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 16 |
Conread position: | 5-165 |
Cow position: | chr18:45104406-45104568 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 116 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 6-220 |
Cow position: | chr18:45571047-45570830 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 160 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 157, 21 |
Conread position: | 7-117 |
Cow position: | chr18:31082315-31082422 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 91 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-144 |
Cow position: | chr18:53038863-53038724 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 7-146 |
Cow position: | chr18:49015158-49015023 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 91, 25 |
Conread position: | 7-155 |
Cow position: | chr18:35367163-35367300 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 7-156 |
Cow position: | chr18:51594771-51594917 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 7-157 |
Cow position: | chr18:30248106-30248252 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 59, 28 |
Conread position: | 7-157 |
Cow position: | chr18:49038495-49038344 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 121 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 7-158 |
Cow position: | chr18:7076988-7076840 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 7-158 |
Cow position: | chr18:10977178-10977329 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 87, 33 |
Conread position: | 7-158 |
Cow position: | chr18:11685015-11684864 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-162 |
Cow position: | chr18:49841311-49841158 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 100, 28 |
Conread position: | 7-163 |
Cow position: | chr18:1571204-1571358 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 100, 46 |
Conread position: | 7-163 |
Cow position: | chr18:5487275-5487127 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 84, 28 |
Conread position: | 7-163 |
Cow position: | chr18:5578340-5578185 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 84, 39 |
Conread position: | 7-163 |
Cow position: | chr18:8171052-8171207 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 84, 76 |
Conread position: | 7-163 |
Cow position: | chr18:13507707-13507860 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 112, 9 |
Conread position: | 7-163 |
Cow position: | chr18:28923814-28923957 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-163 |
Cow position: | chr18:31711528-31711687 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 19, 150 |
Conread position: | 7-163 |
Cow position: | chr18:33299937-33299780 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 98, 78 |
Conread position: | 7-163 |
Cow position: | chr18:37002665-37002512 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 113 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-163 |
Cow position: | chr18:44483740-44483893 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-163 |
Cow position: | chr18:52855088-52854929 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-163 |
Cow position: | chr18:55119908-55119748 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 7-164 |
Cow position: | chr18:18592506-18592353 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-164 |
Cow position: | chr18:20641463-20641611 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-165 |
Cow position: | chr18:4495853-4496009 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 113 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-165 |
Cow position: | chr18:19193332-19193489 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 7-165 |
Cow position: | chr18:22055841-22056003 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 122 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 99, 92 |
Conread position: | 7-165 |
Cow position: | chr18:25647219-25647375 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 124 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 97, 9 |
Conread position: | 7-165 |
Cow position: | chr18:28101666-28101508 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 115 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 113, 52 |
Conread position: | 7-165 |
Cow position: | chr18:37023517-37023676 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 113 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 7-165 |
Cow position: | chr18:48713584-48713426 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 47, 41 |
Conread position: | 7-165 |
Cow position: | chr18:50974261-50974417 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 115 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-165 |
Cow position: | chr18:54130298-54130457 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 103, 92 |
Conread position: | 7-168 |
Cow position: | chr18:25206155-25206315 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 105, 65 |
Conread position: | 7-168 |
Cow position: | chr18:44262663-44262500 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 104, 32 |
Conread position: | 7-175 |
Cow position: | chr18:2849236-2849403 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 111, 154 |
Conread position: | 7-180 |
Cow position: | chr18:50959521-50959347 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 125 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 32, 110 |
Conread position: | 7-182 |
Cow position: | chr18:19883566-19883391 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 125 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 25, 156 |
Conread position: | 7-184 |
Cow position: | chr18:40759240-40759064 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-184 |
Cow position: | chr18:56166014-56165839 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 146, 41 |
Conread position: | 7-186 |
Cow position: | chr18:20174096-20174278 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 160, 88 |
Conread position: | 7-189 |
Cow position: | chr18:4182154-4182338 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 129 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 96, 131 |
Conread position: | 7-191 |
Cow position: | chr18:6609824-6610006 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 132 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 19, 78 |
Conread position: | 7-191 |
Cow position: | chr18:32883337-32883158 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 131 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 7-194 |
Cow position: | chr18:39662812-39662628 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 132 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-195 |
Cow position: | chr18:43555491-43555679 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 129 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 160, 110 |
Conread position: | 7-207 |
Cow position: | chr18:18369328-18369526 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 143 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 102, 40 |
Conread position: | 8-154 |
Cow position: | chr18:43796923-43797066 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 119 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 8-163 |
Cow position: | chr18:47512038-47511884 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 8-165 |
Cow position: | chr18:29356592-29356750 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 8-169 |
Cow position: | chr18:2146547-2146713 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 90, 139 |
Conread position: | 8-179 |
Cow position: | chr18:34219891-34220061 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 127 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 153, 91 |
Conread position: | 9-163 |
Cow position: | chr18:16686304-16686458 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 98, 90 |
Conread position: | 9-163 |
Cow position: | chr18:29958133-29958278 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 9-165 |
Cow position: | chr18:38687111-38686967 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 9-170 |
Cow position: | chr18:44801858-44802019 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 117 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 150, 101 |
Conread position: | 9-191 |
Cow position: | chr18:28657880-28658057 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 11-166 |
Cow position: | chr18:19896422-19896579 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 14-169 |
Cow position: | chr18:43065556-43065400 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 114 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 83, 114 |
Conread position: | 16-164 |
Cow position: | chr18:8300043-8299893 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 17-165 |
Cow position: | chr18:33407640-33407492 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 92, 99 |
Conread position: | 25-164 |
Cow position: | chr18:29991495-29991636 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 25-180 |
Cow position: | chr18:52402952-52403109 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 92, 144 |
Show alignments to all cow chromosomes.