Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A12.3

Conread position: 1-107
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-138
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 105

Conread position: 1-163
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 33

Conread position: 1-165
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 120

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 2-162
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 2-164
Cow position:
Alignm length: 164
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 3-154
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 43

Conread position: 3-162
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 63

Conread position: 3-163
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 56

Conread position: 3-164
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 83

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 101, 116

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 115

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 80

Conread position: 3-183
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 144, 0

Conread position: 3-186
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 113

Conread position: 3-191
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 14

Conread position: 4-158
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 70

Conread position: 4-159
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 4-164
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 95

Conread position: 4-165
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 4-165
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-165
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 4-165
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 4-165
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 115

Conread position: 4-165
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 113

Conread position: 4-180
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 63

Conread position: 4-181
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 176

Conread position: 4-186
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 172, 155

Conread position: 4-187
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 170

Conread position: 4-191
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 163, 111

Conread position: 4-191
Cow position:
Alignm length: 191
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 158

Conread position: 4-193
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 166, 111

Conread position: 5-162
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 5-163
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 79

Conread position: 5-163
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 5-165
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 5-186
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 9

Conread position: 5-189
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 163, 0

Conread position: 5-191
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 160, 80

Conread position: 7-146
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 7-148
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 56

Conread position: 7-149
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 105, 92

Conread position: 7-154
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 7-158
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 102, 78

Conread position: 7-162
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 48

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 92

Conread position: 7-163
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 92

Conread position: 7-163
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 110

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 7-163
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 42

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 7-163
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 99, 92

Conread position: 7-163
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 102, 29

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 7-163
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 7

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 7-164
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 52

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 7-165
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 112, 70

Conread position: 7-165
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 96, 77

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 7-165
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 28

Conread position: 7-165
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 27, 118

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 7-165
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 7-195
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 106, 148

Conread position: 7-198
Cow position:
Alignm length: 195
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 7-223
Cow position:
Alignm length: 222
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 217

Conread position: 8-162
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 9-150
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 12

Conread position: 9-150
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 12

Conread position: 9-163
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 103, 90

Conread position: 9-163
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 63

Conread position: 9-165
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 125

Conread position: 9-186
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 110

Conread position: 9-186
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 76

Conread position: 9-191
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 158, 97

Conread position: 9-192
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 154

Conread position: 10-165
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 11-164
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 12-182
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 87

Conread position: 14-193
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 58

Conread position: 18-163
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 33

Conread position: 18-165
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 14

Conread position: 21-163
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 36-191
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 80

Conread position: 43-165
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.