Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A12.3

Conread position: 1-138
Cow position: chr4:19324039-19323901 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 112, 98

Conread position: 1-157
Cow position: chr4:19097352-19097197 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-160
Cow position: chr4:52831952-52832111 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 112, 53

Conread position: 1-164
Cow position: chr4:19407933-19408097 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 13

Conread position: 1-165
Cow position: chr4:11332162-11331994 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 1-165
Cow position: chr4:20299339-20299175 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 20

Conread position: 1-165
Cow position: chr4:21874240-21874076 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 147

Conread position: 1-165
Cow position: chr4:31136820-31136653 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 47

Conread position: 1-165
Cow position: chr4:38935424-38935258 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 137
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 0

Conread position: 1-165
Cow position: chr4:38952618-38952454 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-198
Cow position: chr4:19119082-19118874 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 2-161
Cow position: chr4:28772003-28772162 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 131

Conread position: 3-163
Cow position: chr4:16799123-16799284 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 4-151
Cow position: chr4:61188807-61188954 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 80

Conread position: 4-158
Cow position: chr4:60131287-60131131 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 4-164
Cow position: chr4:43865795-43865953 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 58

Conread position: 4-165
Cow position: chr4:2885478-2885640 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 4-165
Cow position: chr4:28836598-28836437 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 144

Conread position: 4-165
Cow position: chr4:29106969-29106808 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 117

Conread position: 4-166
Cow position: chr4:4843182-4843343 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 81

Conread position: 4-169
Cow position: chr4:46393499-46393335 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 112

Conread position: 4-182
Cow position: chr4:53100863-53100684 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 92

Conread position: 4-183
Cow position: chr4:2894093-2893912 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 103, 165

Conread position: 4-184
Cow position: chr4:19265635-19265457 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 163, 68

Conread position: 4-191
Cow position: chr4:14542616-14542801 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 163, 63

Conread position: 4-191
Cow position: chr4:42673238-42673051 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 175

Conread position: 4-193
Cow position: chr4:13043325-13043137 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 163, 113

Conread position: 4-193
Cow position: chr4:15635386-15635576 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 163, 0

Conread position: 4-193
Cow position: chr4:26323802-26323608 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 92

Conread position: 4-200
Cow position: chr4:15905164-15904964 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 5-141
Cow position: chr4:620074-620208 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 30

Conread position: 5-158
Cow position: chr4:48152314-48152462 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 5-164
Cow position: chr4:33612298-33612456 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 76

Conread position: 5-164
Cow position: chr4:62771859-62772022 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 5-165
Cow position: chr4:66112010-66112171 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 6-149
Cow position: chr4:54927380-54927524 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 7-143
Cow position: chr4:46550439-46550302 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 77

Conread position: 7-149
Cow position: chr4:34509899-34509758 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 132

Conread position: 7-151
Cow position: chr4:66136549-66136689 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 7-158
Cow position: chr4:10915777-10915934 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 55, 93

Conread position: 7-158
Cow position: chr4:33970838-33970995 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 7-158
Cow position: chr4:34337213-34337364 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 28

Conread position: 7-159
Cow position: chr4:19102823-19102977 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 73

Conread position: 7-161
Cow position: chr4:24001906-24002061 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 91

Conread position: 7-163
Cow position: chr4:10379169-10379012 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 7-163
Cow position: chr4:17084279-17084437 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 7-163
Cow position: chr4:19700154-19700010 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 7-163
Cow position: chr4:21232815-21232970 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 79

Conread position: 7-163
Cow position: chr4:21391753-21391909 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 59

Conread position: 7-163
Cow position: chr4:35982058-35981897 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 95

Conread position: 7-163
Cow position: chr4:37935226-37935380 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 7-163
Cow position: chr4:38157029-38157187 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 92

Conread position: 7-163
Cow position: chr4:51728138-51727980 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 111

Conread position: 7-163
Cow position: chr4:61897476-61897632 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 149, 92

Conread position: 7-163
Cow position: chr4:67466781-67466626 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 7-164
Cow position: chr4:9815288-9815445 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 70

Conread position: 7-164
Cow position: chr4:27530177-27530020 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-164
Cow position: chr4:34369391-34369549 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 7-164
Cow position: chr4:51851265-51851109 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 124

Conread position: 7-165
Cow position: chr4:16762667-16762827 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 94

Conread position: 7-165
Cow position: chr4:20147242-20147087 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 7-165
Cow position: chr4:20327650-20327809 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 64

Conread position: 7-165
Cow position: chr4:24744347-24744507 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 88

Conread position: 7-165
Cow position: chr4:25537607-25537447 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 7-165
Cow position: chr4:47730917-47730758 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 77

Conread position: 7-165
Cow position: chr4:54191148-54190990 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 52

Conread position: 7-165
Cow position: chr4:54789698-54789541 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 94

Conread position: 7-165
Cow position: chr4:66256745-66256588 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 92

Conread position: 7-166
Cow position: chr4:8947454-8947294 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 39

Conread position: 7-168
Cow position: chr4:45799931-45799773 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 103, 70

Conread position: 7-169
Cow position: chr4:52779909-52779749 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 160, 92

Conread position: 7-176
Cow position: chr4:60719160-60718988 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 109

Conread position: 7-177
Cow position: chr4:45563801-45563631 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 75

Conread position: 7-182
Cow position: chr4:13026363-13026188 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 93, 60

Conread position: 7-185
Cow position: chr4:51730009-51729834 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 7-186
Cow position: chr4:48409210-48409390 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 59

Conread position: 7-189
Cow position: chr4:45775279-45775463 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 7-189
Cow position: chr4:51769162-51768986 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 159, 28

Conread position: 7-191
Cow position: chr4:3283388-3283570 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 104, 92

Conread position: 7-191
Cow position: chr4:21065095-21064913 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 74

Conread position: 7-191
Cow position: chr4:33433197-33433387 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 178

Conread position: 7-191
Cow position: chr4:54111801-54111624 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 20

Conread position: 7-191
Cow position: chr4:54455284-54455466 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 31

Conread position: 7-191
Cow position: chr4:56239801-56239980 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 160, 78

Conread position: 7-191
Cow position: chr4:58880902-58881086 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 77

Conread position: 7-193
Cow position: chr4:25806958-25806774 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 160, 108

Conread position: 7-194
Cow position: chr4:46591726-46591537 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 7-196
Cow position: chr4:34641667-34641862 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 7-198
Cow position: chr4:38944199-38944391 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 99, 41

Conread position: 8-134
Cow position: chr4:54541580-54541708 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 110

Conread position: 8-163
Cow position: chr4:23846993-23847144 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 8-165
Cow position: chr4:11194243-11194086 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 91, 28

Conread position: 8-165
Cow position: chr4:51899064-51898909 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 65

Conread position: 8-189
Cow position: chr4:65950713-65950528 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 159, 107

Conread position: 8-191
Cow position: chr4:20027045-20027231 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 76

Conread position: 9-148
Cow position: chr4:48486051-48485911 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 121

Conread position: 9-162
Cow position: chr4:36290681-36290533 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 29

Conread position: 9-163
Cow position: chr4:44449452-44449600 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 26

Conread position: 9-166
Cow position: chr4:3850608-3850453 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 9-175
Cow position: chr4:5913290-5913457 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 25

Conread position: 9-184
Cow position: chr4:39231464-39231640 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 90

Conread position: 9-206
Cow position: chr4:12049303-12049106 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 37

Conread position: 21-163
Cow position: chr4:20139470-20139613 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 83, 96

Conread position: 28-191
Cow position: chr4:2096360-2096197 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 89

Show alignments to all cow chromosomes.