Cow genome map

Conread name: Ss1.1-Pig4-TMW8062A12.3

Conread position: 1-147
Cow position: chr7:33393423-33393275 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 1-163
Cow position: chr7:49751238-49751080 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 118, 20

Conread position: 1-164
Cow position: chr7:27509829-27509671 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 1-165
Cow position: chr7:8658629-8658465 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 105, 85

Conread position: 1-165
Cow position: chr7:20534986-20534827 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 83

Conread position: 1-165
Cow position: chr7:22793458-22793300 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 154, 93

Conread position: 1-165
Cow position: chr7:32894134-32894298 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 103, 111

Conread position: 1-165
Cow position: chr7:35274966-35275129 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 106, 34

Conread position: 1-165
Cow position: chr7:35300303-35300468 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 92

Conread position: 2-161
Cow position: chr7:48714967-48714807 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 3-158
Cow position: chr7:45331650-45331497 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 45

Conread position: 3-163
Cow position: chr7:3256233-3256400 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 81

Conread position: 4-165
Cow position: chr7:8821585-8821423 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 116

Conread position: 4-165
Cow position: chr7:8877991-8877830 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 91

Conread position: 4-165
Cow position: chr7:9781613-9781773 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 4-165
Cow position: chr7:21166131-21166293 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 101, 118

Conread position: 4-165
Cow position: chr7:40008940-40008772 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 4-165
Cow position: chr7:40425201-40425362 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 81

Conread position: 4-165
Cow position: chr7:53097702-53097539 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 4-169
Cow position: chr7:3304688-3304518 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 4-186
Cow position: chr7:29682340-29682522 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 95, 153

Conread position: 4-186
Cow position: chr7:34428687-34428506 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 112

Conread position: 4-190
Cow position: chr7:66894428-66894618 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 115

Conread position: 5-163
Cow position: chr7:11854605-11854446 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 79

Conread position: 5-163
Cow position: chr7:11958329-11958482 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 5-163
Cow position: chr7:40074794-40074627 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 5-165
Cow position: chr7:11869730-11869887 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 42

Conread position: 5-165
Cow position: chr7:58923508-58923349 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 5-165
Cow position: chr7:61790242-61790403 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 134

Conread position: 5-186
Cow position: chr7:21565454-21565631 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 28

Conread position: 5-198
Cow position: chr7:29510054-29509870 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 7-137
Cow position: chr7:39451041-39451172 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 7-146
Cow position: chr7:4764953-4764814 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 73

Conread position: 7-148
Cow position: chr7:61699586-61699729 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 7-151
Cow position: chr7:48667522-48667377 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 47

Conread position: 7-151
Cow position: chr7:50494103-50493957 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 7-157
Cow position: chr7:17713363-17713513 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 100

Conread position: 7-157
Cow position: chr7:26263543-26263700 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 7-158
Cow position: chr7:18188121-18188269 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 39

Conread position: 7-158
Cow position: chr7:49903881-49903728 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 91, 107

Conread position: 7-159
Cow position: chr7:49106093-49106244 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 46

Conread position: 7-159
Cow position: chr7:68170492-68170648 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 33

Conread position: 7-162
Cow position: chr7:38082264-38082110 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 77

Conread position: 7-162
Cow position: chr7:51644759-51644602 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 100, 78

Conread position: 7-163
Cow position: chr7:3773158-3773315 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 52

Conread position: 7-163
Cow position: chr7:5199443-5199597 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 112, 37

Conread position: 7-163
Cow position: chr7:18288162-18288315 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 28

Conread position: 7-163
Cow position: chr7:23646719-23646560 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 93

Conread position: 7-163
Cow position: chr7:26631704-26631860 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 104

Conread position: 7-163
Cow position: chr7:27079735-27079580 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 7-163
Cow position: chr7:28544285-28544129 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 109

Conread position: 7-163
Cow position: chr7:28917199-28917041 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 94

Conread position: 7-163
Cow position: chr7:30276843-30276690 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 98, 111

Conread position: 7-163
Cow position: chr7:38263781-38263625 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 41

Conread position: 7-163
Cow position: chr7:39416018-39415862 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 101, 111

Conread position: 7-163
Cow position: chr7:46818386-46818540 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 135

Conread position: 7-163
Cow position: chr7:48243780-48243627 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 76

Conread position: 7-164
Cow position: chr7:31094239-31094397 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 110

Conread position: 7-164
Cow position: chr7:34412170-34412321 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 7-164
Cow position: chr7:38429603-38429759 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 92

Conread position: 7-164
Cow position: chr7:46856855-46857007 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 7-164
Cow position: chr7:50066008-50066160 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 124

Conread position: 7-165
Cow position: chr7:10257-10096 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 82, 58

Conread position: 7-165
Cow position: chr7:3336442-3336600 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-165
Cow position: chr7:9136946-9136785 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 7-165
Cow position: chr7:9800461-9800305 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 53

Conread position: 7-165
Cow position: chr7:23936219-23936060 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 76

Conread position: 7-165
Cow position: chr7:24220776-24220622 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 7-165
Cow position: chr7:29122008-29121853 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 131, 26

Conread position: 7-165
Cow position: chr7:32915223-32915061 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 113

Conread position: 7-165
Cow position: chr7:40067769-40067611 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 112, 79

Conread position: 7-165
Cow position: chr7:42637079-42636932 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 7-165
Cow position: chr7:50772624-50772782 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 111, 93

Conread position: 7-165
Cow position: chr7:51319915-51319750 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 7-165
Cow position: chr7:54054696-54054539 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 7-165
Cow position: chr7:55085764-55085608 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 7-165
Cow position: chr7:60732530-60732688 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 28

Conread position: 7-165
Cow position: chr7:60870049-60869899 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 145, 25

Conread position: 7-185
Cow position: chr7:63121308-63121486 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 26

Conread position: 7-191
Cow position: chr7:49417714-49417530 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 78

Conread position: 7-194
Cow position: chr7:14536173-14536359 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 24

Conread position: 7-194
Cow position: chr7:36665433-36665255 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 160, 74

Conread position: 8-158
Cow position: chr7:32946175-32946026 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 104, 91

Conread position: 8-160
Cow position: chr7:57593537-57593384 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 76

Conread position: 8-163
Cow position: chr7:8102528-8102375 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 8-163
Cow position: chr7:42593171-42593326 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 8-163
Cow position: chr7:53697800-53697958 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 8-165
Cow position: chr7:53053296-53053454 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 110, 0

Conread position: 8-186
Cow position: chr7:14174319-14174489 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 151, 27

Conread position: 8-198
Cow position: chr7:60483321-60483509 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 21

Conread position: 9-158
Cow position: chr7:39325832-39325693 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 9-163
Cow position: chr7:56886403-56886556 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 90

Conread position: 9-165
Cow position: chr7:47513579-47513736 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 7

Conread position: 10-165
Cow position: chr7:44209058-44208902 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 11-165
Cow position: chr7:14541965-14542107 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 12-165
Cow position: chr7:33720138-33719985 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-191
Cow position: chr7:31170848-31171025 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 91, 70

Show alignments to all cow chromosomes.