Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8062A16.5 |
| Conread position: | 827-1081 |
| Cow position: | chr25:7726930-7726670 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 861-1081 |
| Cow position: | chr25:28945249-28945028 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 869-1074 |
| Cow position: | chr25:31705456-31705239 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 873-1051 |
| Cow position: | chr25:20788605-20788784 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 105, 175 |
| Conread position: | 873-1080 |
| Cow position: | chr25:24669227-24669435 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 157 |
| Conread position: | 875-1070 |
| Cow position: | chr25:22154252-22154043 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 875-1078 |
| Cow position: | chr25:17725257-17725055 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 145 |
| Conread position: | 875-1080 |
| Cow position: | chr25:22179133-22178926 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 176 |
| Conread position: | 875-1081 |
| Cow position: | chr25:26655114-26654920 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 876-1072 |
| Cow position: | chr25:28662329-28662127 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 876-1074 |
| Cow position: | chr25:11957024-11956819 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 877-1053 |
| Cow position: | chr25:8410815-8410998 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 878-1080 |
| Cow position: | chr25:24863086-24862884 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 879-1081 |
| Cow position: | chr25:26224819-26225021 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 879-1090 |
| Cow position: | chr25:17119961-17119741 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 880-1080 |
| Cow position: | chr25:21191692-21191498 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 880-1081 |
| Cow position: | chr25:26136604-26136815 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 881-1008 |
| Cow position: | chr25:23863035-23863165 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 882-1044 |
| Cow position: | chr25:7185060-7185231 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 882-1052 |
| Cow position: | chr25:21547370-21547194 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 20 |
| Conread position: | 883-1081 |
| Cow position: | chr25:432835-433040 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 47 |
| Conread position: | 883-1086 |
| Cow position: | chr25:17704950-17704747 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 23 |
| Conread position: | 884-1033 |
| Cow position: | chr25:37648994-37648838 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 148 |
| Conread position: | 884-1053 |
| Cow position: | chr25:9635532-9635366 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 884-1080 |
| Cow position: | chr25:22315417-22315214 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 884-1080 |
| Cow position: | chr25:26089616-26089804 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 884-1081 |
| Cow position: | chr25:18760496-18760700 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 885-1081 |
| Cow position: | chr25:16921582-16921789 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 886-1074 |
| Cow position: | chr25:33100782-33100590 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 886-1075 |
| Cow position: | chr25:7403128-7403327 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 886-1075 |
| Cow position: | chr25:19832210-19832015 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 129 |
| Conread position: | 886-1076 |
| Cow position: | chr25:12223773-12223583 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 179, 16 |
| Conread position: | 886-1078 |
| Cow position: | chr25:31732122-31732310 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 886-1080 |
| Cow position: | chr25:12305489-12305285 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 886-1080 |
| Cow position: | chr25:20008344-20008141 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 886-1080 |
| Cow position: | chr25:36872845-36873047 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 886-1090 |
| Cow position: | chr25:36370031-36369818 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 85, 150 |
| Conread position: | 886-1090 |
| Cow position: | chr25:36375722-36375509 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 85, 150 |
| Conread position: | 886-1092 |
| Cow position: | chr25:23519827-23520033 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 81, 49 |
| Conread position: | 887-1070 |
| Cow position: | chr25:32745544-32745357 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 887-1080 |
| Cow position: | chr25:15273875-15273682 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 887-1125 |
| Cow position: | chr25:23998730-23998961 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 118, 82 |
| Conread position: | 888-1047 |
| Cow position: | chr25:13565125-13565281 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 888-1061 |
| Cow position: | chr25:5922506-5922679 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 91 |
| Conread position: | 888-1073 |
| Cow position: | chr25:5808156-5807961 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 888-1074 |
| Cow position: | chr25:2111244-2111064 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 888-1074 |
| Cow position: | chr25:9023953-9023766 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 86, 125 |
| Conread position: | 888-1081 |
| Cow position: | chr25:33686473-33686677 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 888-1094 |
| Cow position: | chr25:35109070-35109276 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 192, 76 |
| Conread position: | 888-1128 |
| Cow position: | chr25:37965472-37965225 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 889-1036 |
| Cow position: | chr25:28939933-28940088 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 889-1045 |
| Cow position: | chr25:20019770-20019926 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 889-1075 |
| Cow position: | chr25:15294988-15294810 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 889-1080 |
| Cow position: | chr25:2362032-2361846 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 889-1080 |
| Cow position: | chr25:2662600-2662408 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 889-1086 |
| Cow position: | chr25:40904618-40904827 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 889-1116 |
| Cow position: | chr25:18551127-18551358 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 890-1072 |
| Cow position: | chr25:19679558-19679372 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 109 |
| Conread position: | 890-1080 |
| Cow position: | chr25:15349702-15349896 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 153 |
| Conread position: | 890-1081 |
| Cow position: | chr25:5515498-5515314 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 890-1081 |
| Cow position: | chr25:9002875-9002680 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 890-1094 |
| Cow position: | chr25:17919183-17918967 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 56 |
| Conread position: | 891-1074 |
| Cow position: | chr25:35802458-35802648 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 891-1075 |
| Cow position: | chr25:1838448-1838255 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 891-1078 |
| Cow position: | chr25:7277120-7277314 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 80, 143 |
| Conread position: | 891-1078 |
| Cow position: | chr25:33311118-33311315 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 891-1080 |
| Cow position: | chr25:33663704-33663896 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 113 |
| Conread position: | 891-1081 |
| Cow position: | chr25:26087724-26087527 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 891-1086 |
| Cow position: | chr25:33555812-33555610 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 892-1074 |
| Cow position: | chr25:7311190-7311380 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 892-1080 |
| Cow position: | chr25:1840525-1840333 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 892-1080 |
| Cow position: | chr25:20203112-20202922 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 892-1081 |
| Cow position: | chr25:18201725-18201918 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 39 |
| Conread position: | 892-1081 |
| Cow position: | chr25:18491240-18491046 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 892-1081 |
| Cow position: | chr25:30817096-30816897 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 893-1080 |
| Cow position: | chr25:18720924-18721111 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 893-1080 |
| Cow position: | chr25:21893539-21893347 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 893-1081 |
| Cow position: | chr25:11780467-11780286 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 893-1088 |
| Cow position: | chr25:17724017-17724223 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 893-1105 |
| Cow position: | chr25:26989403-26989181 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 893-1127 |
| Cow position: | chr25:31926181-31926414 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 894-1090 |
| Cow position: | chr25:33101411-33101608 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 183, 20 |
| Conread position: | 894-1091 |
| Cow position: | chr25:30319246-30319451 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 173 |
| Conread position: | 894-1095 |
| Cow position: | chr25:34768547-34768740 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 187, 8 |
| Conread position: | 895-1070 |
| Cow position: | chr25:22768419-22768237 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 895-1075 |
| Cow position: | chr25:7330798-7330616 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 52 |
| Conread position: | 896-1080 |
| Cow position: | chr25:36555499-36555680 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 896-1081 |
| Cow position: | chr25:5846605-5846801 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 897-1073 |
| Cow position: | chr25:10643117-10643293 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 897-1079 |
| Cow position: | chr25:36840581-36840407 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 897-1080 |
| Cow position: | chr25:7217016-7216835 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 897-1080 |
| Cow position: | chr25:13826630-13826444 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 897-1081 |
| Cow position: | chr25:13272768-13272577 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 897-1081 |
| Cow position: | chr25:13325768-13325588 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 897-1086 |
| Cow position: | chr25:36082068-36081878 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 897-1086 |
| Cow position: | chr25:36746249-36746445 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 898-1075 |
| Cow position: | chr25:22373288-22373476 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 898-1081 |
| Cow position: | chr25:1763282-1763095 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 899-1078 |
| Cow position: | chr25:35052421-35052611 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 899-1081 |
| Cow position: | chr25:14164395-14164207 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 64, 166 |
| Conread position: | 901-1081 |
| Cow position: | chr25:31514379-31514189 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 902-1053 |
| Cow position: | chr25:14210170-14210019 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 902-1073 |
| Cow position: | chr25:10791625-10791798 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 67, 120 |
| Conread position: | 902-1081 |
| Cow position: | chr25:17658806-17658619 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 902-1105 |
| Cow position: | chr25:30462127-30462323 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 903-1053 |
| Cow position: | chr25:10303720-10303570 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 903-1075 |
| Cow position: | chr25:11857793-11857973 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 903-1081 |
| Cow position: | chr25:9269533-9269356 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 70, 156 |
| Conread position: | 903-1081 |
| Cow position: | chr25:9616031-9615845 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 903-1081 |
| Cow position: | chr25:14513299-14513122 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 173, 74 |
| Conread position: | 904-1074 |
| Cow position: | chr25:36156003-36155833 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 106, 121 |
| Conread position: | 905-1080 |
| Cow position: | chr25:26072372-26072548 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 155 |
| Conread position: | 908-1092 |
| Cow position: | chr25:26156597-26156782 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 173, 138 |
| Conread position: | 910-1081 |
| Cow position: | chr25:7380652-7380831 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 910-1081 |
| Cow position: | chr25:18646766-18646593 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 911-1053 |
| Cow position: | chr25:18877419-18877559 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 911-1080 |
| Cow position: | chr25:20023209-20023377 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 911-1081 |
| Cow position: | chr25:6259069-6258891 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 913-1076 |
| Cow position: | chr25:23244821-23244989 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 915-1144 |
| Cow position: | chr25:11855366-11855605 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 54, 137 |
| Conread position: | 916-1053 |
| Cow position: | chr25:447726-447867 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 923-1095 |
| Cow position: | chr25:6718081-6718254 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 105 |
| Conread position: | 927-1086 |
| Cow position: | chr25:10138491-10138321 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 135 |
| Conread position: | 928-1081 |
| Cow position: | chr25:16065050-16064900 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 953-1081 |
| Cow position: | chr25:6473951-6474079 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 965-1081 |
| Cow position: | chr25:23016144-23016028 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 966-1081 |
| Cow position: | chr25:34241982-34242096 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 966-1101 |
| Cow position: | chr25:27520635-27520769 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 967-1081 |
| Cow position: | chr25:30656527-30656638 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 968-1079 |
| Cow position: | chr25:36120619-36120508 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 974-1074 |
| Cow position: | chr25:3983399-3983301 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 978-1081 |
| Cow position: | chr25:4221492-4221595 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.