Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8062A16.5
        

               Conread position:
               825-1069
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               844-1081
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 42
               

               Conread position:
               859-1081
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               869-1081
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               870-1078
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               870-1081
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               872-1074
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 10
               

               Conread position:
               872-1081
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 36
               

               Conread position:
               873-1073
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               873-1075
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               102, 11
               

               Conread position:
               873-1081
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               874-1051
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               874-1064
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               103, 32
               

               Conread position:
               875-1081
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               876-1080
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               876-1081
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               877-1081
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               881-1081
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               153, 73
               

               Conread position:
               882-1066
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               882-1081
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               82, 25
               

               Conread position:
               882-1081
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               883-1080
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               86, 174
               

               Conread position:
               883-1081
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               92, 152
               

               Conread position:
               883-1081
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               884-1075
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               884-1080
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               10, 113
               

               Conread position:
               884-1081
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 178
               

               Conread position:
               885-1062
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               885-1080
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               885-1081
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 121
               

               Conread position:
               886-1052
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               886-1065
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               886-1073
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               886-1075
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               886-1079
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               886-1081
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               71, 144
               

               Conread position:
               886-1081
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               886-1081
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               87, 46
               

               Conread position:
               886-1081
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               886-1081
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               886-1081
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               887-1052
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               887-1081
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               887-1086
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               888-1080
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               62, 179
               

               Conread position:
               888-1085
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               888-1123
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               84, 181
               

               Conread position:
               889-1073
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               81, 177
               

               Conread position:
               889-1080
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               889-1102
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 41
               

               Conread position:
               890-1086
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               891-1049
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               891-1060
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               891-1062
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               891-1076
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               891-1079
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               891-1080
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               891-1081
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               81, 45
               

               Conread position:
               891-1081
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               82, 173
               

               Conread position:
               891-1081
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               153, 81
               

               Conread position:
               891-1081
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               891-1081
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               891-1081
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 61
               

               Conread position:
               891-1081
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               90, 129
               

               Conread position:
               891-1086
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 54
               

               Conread position:
               891-1124
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               892-1069
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 131
               

               Conread position:
               892-1078
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               892-1079
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               892-1081
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               79, 52
               

               Conread position:
               892-1081
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               82, 164
               

               Conread position:
               893-1073
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               893-1073
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               893-1080
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               894-1052
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               894-1079
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               894-1081
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               81, 165
               

               Conread position:
               894-1089
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               895-1079
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 76
               

               Conread position:
               895-1090
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               83, 36
               

               Conread position:
               896-1067
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               896-1075
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 130
               

               Conread position:
               897-1080
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               898-1049
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               898-1080
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               62, 156
               

               Conread position:
               898-1080
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               77, 5
               

               Conread position:
               899-1080
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               899-1080
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               902-1075
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               902-1081
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               902-1086
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 124
               

               Conread position:
               903-1080
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               69, 110
               

               Conread position:
               903-1081
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               905-1081
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               74, 61
               

               Conread position:
               907-1052
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               908-1081
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 25
               

               Conread position:
               910-1080
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 97
               

               Conread position:
               910-1081
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               919-1081
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               962-1086
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               965-1090
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               965-1094
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               966-1081
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               967-1081
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               968-1081
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               977-1081
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.