Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063E11.3
        

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               33, 134
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               70, 151
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-625
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 41
               

               Conread position:
               1-658
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 125
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 147
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 144
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 135
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 144
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 87
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               2-698
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               345, 56
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 128
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 211
               

               Conread position:
               4-683
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               433
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               4-684
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 275
               

               Conread position:
               4-707
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               5-598
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               387
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 128
               

               Conread position:
               5-707
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 167
               

               Conread position:
               5-707
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               7-703
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               7-707
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 127
               

               Conread position:
               7-707
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 126
               

               Conread position:
               7-707
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 125
               

               Conread position:
               13-707
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 120
               

               Conread position:
               35-661
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               71-698
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               419
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               156, 58
               

               Conread position:
               116-569
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               298, 64
               

               Conread position:
               124-327
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               106, 20
               

               Conread position:
               128-409
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               128-706
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 60
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 62
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               128-708
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               150-331
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               49, 5
               

               Conread position:
               157-707
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 118
               

               Conread position:
               158-680
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 92
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               159-669
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 48
               

               Conread position:
               159-707
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 29
               

               Conread position:
               159-707
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 37
               

               Conread position:
               163-412
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               151, 90
               

               Conread position:
               164-676
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               341
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               165-683
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               345
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               146, 82
               

               Conread position:
               171-707
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               172-706
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 165
               

               Conread position:
               180-707
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               185-707
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 11
               

               Conread position:
               196-707
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 11
               

               Conread position:
               215-707
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 95
               

               Conread position:
               222-569
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               194, 108
               

               Conread position:
               233-643
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               93, 56
               

               Conread position:
               250-708
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               318
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               105, 43
               

               Conread position:
               267-707
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               316-686
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               359-692
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               359-706
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               48, 227
               

               Conread position:
               369-707
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               130, 38
               

               Conread position:
               409-683
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 273
               

               Conread position:
               416-706
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 82
               

               Conread position:
               417-707
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               148, 55
               

               Conread position:
               421-611
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               421-707
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               77, 46
               

               Conread position:
               422-706
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               85, 98
               

               Conread position:
               422-707
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               423-677
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 136
               

               Conread position:
               425-701
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               426-582
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               448-707
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               450-707
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 190
               

               Conread position:
               476-707
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               514-696
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               521-707
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 159
               

               Conread position:
               571-707
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               571-708
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               575-706
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               114, 0
               
Show alignments to all cow chromosomes.