Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-413
Cow position:
Alignm length: 426
Alignm identity: 284
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 45, 134

Conread position: 1-436
Cow position:
Alignm length: 439
Alignm identity: 290
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 126, 36

Conread position: 1-596
Cow position:
Alignm length: 610
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 51

Conread position: 1-629
Cow position:
Alignm length: 655
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-678
Cow position:
Alignm length: 703
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 50

Conread position: 1-698
Cow position:
Alignm length: 730
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-698
Cow position:
Alignm length: 730
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-698
Cow position:
Alignm length: 727
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-706
Cow position:
Alignm length: 758
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 229

Conread position: 1-707
Cow position:
Alignm length: 742
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 742
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 10

Conread position: 1-707
Cow position:
Alignm length: 753
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 132

Conread position: 1-707
Cow position:
Alignm length: 742
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 137

Conread position: 1-707
Cow position:
Alignm length: 733
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 1-707
Cow position:
Alignm length: 736
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 102

Conread position: 1-707
Cow position:
Alignm length: 747
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 193

Conread position: 1-707
Cow position:
Alignm length: 751
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 218

Conread position: 1-707
Cow position:
Alignm length: 749
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 2-413
Cow position:
Alignm length: 418
Alignm identity: 284
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 67

Conread position: 2-707
Cow position:
Alignm length: 733
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 2-707
Cow position:
Alignm length: 716
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 2-708
Cow position:
Alignm length: 730
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 131

Conread position: 2-708
Cow position:
Alignm length: 727
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 50

Conread position: 3-707
Cow position:
Alignm length: 735
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 116

Conread position: 7-703
Cow position:
Alignm length: 732
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 128

Conread position: 7-707
Cow position:
Alignm length: 726
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 7-707
Cow position:
Alignm length: 734
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 7-707
Cow position:
Alignm length: 731
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 7-708
Cow position:
Alignm length: 731
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 126

Conread position: 13-692
Cow position:
Alignm length: 708
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 122

Conread position: 17-706
Cow position:
Alignm length: 706
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 61

Conread position: 18-707
Cow position:
Alignm length: 728
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 115

Conread position: 40-686
Cow position:
Alignm length: 669
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 154

Conread position: 100-686
Cow position:
Alignm length: 622
Alignm identity: 398
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 79

Conread position: 116-682
Cow position:
Alignm length: 600
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 77

Conread position: 128-412
Cow position:
Alignm length: 297
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 82

Conread position: 128-452
Cow position:
Alignm length: 340
Alignm identity: 226
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 10

Conread position: 128-707
Cow position:
Alignm length: 596
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 610
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 594
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 190

Conread position: 138-698
Cow position:
Alignm length: 583
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 124

Conread position: 138-707
Cow position:
Alignm length: 600
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 138-707
Cow position:
Alignm length: 594
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 178

Conread position: 138-707
Cow position:
Alignm length: 598
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 151-663
Cow position:
Alignm length: 543
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 158-707
Cow position:
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 164-675
Cow position:
Alignm length: 535
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 160

Conread position: 165-574
Cow position:
Alignm length: 422
Alignm identity: 265
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 149, 36

Conread position: 172-512
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 59, 345

Conread position: 172-703
Cow position:
Alignm length: 546
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 39

Conread position: 185-708
Cow position:
Alignm length: 560
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 15

Conread position: 198-707
Cow position:
Alignm length: 535
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 245

Conread position: 214-707
Cow position:
Alignm length: 523
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 419

Conread position: 354-707
Cow position:
Alignm length: 369
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 64, 109

Conread position: 356-707
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 21

Conread position: 383-682
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 29, 12

Conread position: 408-707
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 90, 61

Conread position: 415-707
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 55

Conread position: 416-707
Cow position:
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 276

Conread position: 458-680
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 101

Conread position: 471-707
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 29, 62

Conread position: 475-686
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 103, 30

Conread position: 538-686
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 552-707
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 138, 0

Show alignments to all cow chromosomes.