Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-340
Cow position:
Alignm length: 345
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 149

Conread position: 1-342
Cow position:
Alignm length: 350
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 167

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 252
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 52, 127

Conread position: 1-413
Cow position:
Alignm length: 433
Alignm identity: 278
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 172

Conread position: 1-425
Cow position:
Alignm length: 439
Alignm identity: 288
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 68, 103

Conread position: 1-427
Cow position:
Alignm length: 450
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 1-561
Cow position:
Alignm length: 581
Alignm identity: 374
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 140

Conread position: 1-567
Cow position:
Alignm length: 587
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 93

Conread position: 1-600
Cow position:
Alignm length: 621
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 45

Conread position: 1-683
Cow position:
Alignm length: 723
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 196

Conread position: 1-686
Cow position:
Alignm length: 704
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-698
Cow position:
Alignm length: 731
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 117

Conread position: 1-698
Cow position:
Alignm length: 722
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 119

Conread position: 1-698
Cow position:
Alignm length: 734
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-706
Cow position:
Alignm length: 740
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 125

Conread position: 1-706
Cow position:
Alignm length: 741
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 38

Conread position: 1-707
Cow position:
Alignm length: 738
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 736
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-707
Cow position:
Alignm length: 743
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 107

Conread position: 1-707
Cow position:
Alignm length: 747
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 134

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 169

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 745
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 137

Conread position: 1-707
Cow position:
Alignm length: 736
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 38

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 49

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 755
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 98

Conread position: 1-707
Cow position:
Alignm length: 735
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 52

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 51

Conread position: 1-707
Cow position:
Alignm length: 738
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 724
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 217

Conread position: 1-708
Cow position:
Alignm length: 756
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 175

Conread position: 1-708
Cow position:
Alignm length: 743
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-708
Cow position:
Alignm length: 737
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 25

Conread position: 2-320
Cow position:
Alignm length: 326
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 2-338
Cow position:
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 81

Conread position: 2-573
Cow position:
Alignm length: 598
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 35

Conread position: 2-707
Cow position:
Alignm length: 750
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 133

Conread position: 2-707
Cow position:
Alignm length: 733
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 91

Conread position: 2-707
Cow position:
Alignm length: 731
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 40

Conread position: 2-707
Cow position:
Alignm length: 745
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 307

Conread position: 3-602
Cow position:
Alignm length: 641
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 93

Conread position: 3-707
Cow position:
Alignm length: 719
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 3-707
Cow position:
Alignm length: 738
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 132

Conread position: 4-703
Cow position:
Alignm length: 725
Alignm identity: 437
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 76

Conread position: 4-707
Cow position:
Alignm length: 735
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 130

Conread position: 5-510
Cow position:
Alignm length: 526
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 88

Conread position: 5-707
Cow position:
Alignm length: 728
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 7-204
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 7-597
Cow position:
Alignm length: 622
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 122

Conread position: 7-598
Cow position:
Alignm length: 617
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 124

Conread position: 7-707
Cow position:
Alignm length: 738
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 79

Conread position: 9-707
Cow position:
Alignm length: 732
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 13-607
Cow position:
Alignm length: 629
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 122

Conread position: 13-686
Cow position:
Alignm length: 706
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 122

Conread position: 13-706
Cow position:
Alignm length: 728
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 122

Conread position: 36-698
Cow position:
Alignm length: 692
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 42-697
Cow position:
Alignm length: 675
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 36

Conread position: 43-707
Cow position:
Alignm length: 696
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 79-703
Cow position:
Alignm length: 654
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 131

Conread position: 79-707
Cow position:
Alignm length: 652
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 27

Conread position: 90-686
Cow position:
Alignm length: 617
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 80

Conread position: 101-705
Cow position:
Alignm length: 625
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 66

Conread position: 124-707
Cow position:
Alignm length: 602
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 140

Conread position: 128-351
Cow position:
Alignm length: 232
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 128-652
Cow position:
Alignm length: 558
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-703
Cow position:
Alignm length: 608
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 56

Conread position: 128-707
Cow position:
Alignm length: 603
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 606
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 82

Conread position: 128-707
Cow position:
Alignm length: 608
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 133-707
Cow position:
Alignm length: 591
Alignm identity: 379
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 279, 18

Conread position: 134-707
Cow position:
Alignm length: 604
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 64

Conread position: 138-653
Cow position:
Alignm length: 535
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 177

Conread position: 138-683
Cow position:
Alignm length: 571
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 139

Conread position: 138-707
Cow position:
Alignm length: 588
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 178

Conread position: 138-707
Cow position:
Alignm length: 597
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 95

Conread position: 138-707
Cow position:
Alignm length: 604
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 157-707
Cow position:
Alignm length: 564
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 44

Conread position: 158-556
Cow position:
Alignm length: 419
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 388

Conread position: 158-707
Cow position:
Alignm length: 575
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 158-707
Cow position:
Alignm length: 589
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 113

Conread position: 158-707
Cow position:
Alignm length: 582
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 158-708
Cow position:
Alignm length: 589
Alignm identity: 369
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 68

Conread position: 158-708
Cow position:
Alignm length: 583
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 50

Conread position: 159-707
Cow position:
Alignm length: 576
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 47

Conread position: 161-707
Cow position:
Alignm length: 579
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 163-686
Cow position:
Alignm length: 553
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 48

Conread position: 163-707
Cow position:
Alignm length: 576
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 23

Conread position: 164-707
Cow position:
Alignm length: 564
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 9

Conread position: 172-654
Cow position:
Alignm length: 515
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 372

Conread position: 172-688
Cow position:
Alignm length: 549
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 35

Conread position: 172-703
Cow position:
Alignm length: 568
Alignm identity: 368
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 153, 72

Conread position: 172-703
Cow position:
Alignm length: 561
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 333

Conread position: 172-707
Cow position:
Alignm length: 553
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 35

Conread position: 172-707
Cow position:
Alignm length: 560
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 24

Conread position: 172-707
Cow position:
Alignm length: 560
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 19

Conread position: 180-707
Cow position:
Alignm length: 553
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 134

Conread position: 181-680
Cow position:
Alignm length: 525
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 364

Conread position: 188-683
Cow position:
Alignm length: 517
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 19

Conread position: 189-707
Cow position:
Alignm length: 554
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 199

Conread position: 194-707
Cow position:
Alignm length: 533
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 11

Conread position: 207-707
Cow position:
Alignm length: 516
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 129

Conread position: 214-453
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 193

Conread position: 218-707
Cow position:
Alignm length: 519
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 225-707
Cow position:
Alignm length: 508
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 44

Conread position: 225-707
Cow position:
Alignm length: 504
Alignm identity: 329
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 130, 52

Conread position: 228-411
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 228-707
Cow position:
Alignm length: 503
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 369

Conread position: 230-707
Cow position:
Alignm length: 513
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 146

Conread position: 233-600
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 325

Conread position: 236-686
Cow position:
Alignm length: 475
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 307

Conread position: 236-708
Cow position:
Alignm length: 506
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 30

Conread position: 239-707
Cow position:
Alignm length: 493
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 76

Conread position: 265-708
Cow position:
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 119

Conread position: 313-701
Cow position:
Alignm length: 404
Alignm identity: 259
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 17

Conread position: 315-707
Cow position:
Alignm length: 412
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 191

Conread position: 329-707
Cow position:
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 75

Conread position: 354-708
Cow position:
Alignm length: 375
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 61, 270

Conread position: 357-670
Cow position:
Alignm length: 320
Alignm identity: 205
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 147

Conread position: 360-707
Cow position:
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 17

Conread position: 369-706
Cow position:
Alignm length: 368
Alignm identity: 251
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 155

Conread position: 412-707
Cow position:
Alignm length: 314
Alignm identity: 214
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 86, 61

Conread position: 417-706
Cow position:
Alignm length: 302
Alignm identity: 200
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 75

Conread position: 420-707
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 81

Conread position: 421-615
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 421-707
Cow position:
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 108

Conread position: 421-707
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 276

Conread position: 421-708
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 429-707
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 41

Conread position: 436-708
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 45

Conread position: 446-686
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 28

Conread position: 449-707
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 49, 167

Conread position: 461-707
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 113, 205

Conread position: 473-707
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 25, 147

Conread position: 482-707
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 495-707
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 529-707
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 143

Conread position: 543-707
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 68

Conread position: 548-707
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 84

Conread position: 571-707
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 577-707
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 50

Conread position: 579-707
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 0

Show alignments to all cow chromosomes.