Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063E11.3
        

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               36, 147
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               42, 168
               

               Conread position:
               1-613
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-624
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 116
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 48
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 132
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 148
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               463
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               37, 249
               

               Conread position:
               4-575
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 129
               

               Conread position:
               5-413
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               7-410
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 131
               

               Conread position:
               8-707
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 125
               

               Conread position:
               20-402
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               219, 57
               

               Conread position:
               24-708
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 85
               

               Conread position:
               45-707
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 85
               

               Conread position:
               128-525
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 246
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 83
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               159-698
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 116
               

               Conread position:
               159-706
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 39
               

               Conread position:
               159-707
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               164-698
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               165-707
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 69
               

               Conread position:
               171-686
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 25
               

               Conread position:
               171-707
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 114
               

               Conread position:
               172-427
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               140, 49
               

               Conread position:
               172-663
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               336
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               154, 119
               

               Conread position:
               172-707
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               174-421
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               187-478
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               189-707
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               207-707
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 150
               

               Conread position:
               208-707
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 155
               

               Conread position:
               214-707
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 63
               

               Conread position:
               214-707
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 46
               

               Conread position:
               218-707
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               335
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               94, 179
               

               Conread position:
               225-613
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               282
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               130, 108
               

               Conread position:
               225-698
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               310
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               96, 85
               

               Conread position:
               228-708
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 28
               

               Conread position:
               299-703
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               281
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               60, 205
               

               Conread position:
               317-698
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               38, 167
               

               Conread position:
               318-707
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 164
               

               Conread position:
               321-707
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 332
               

               Conread position:
               324-707
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               39, 219
               

               Conread position:
               325-707
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 265
               

               Conread position:
               327-706
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 184
               

               Conread position:
               359-707
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 201
               

               Conread position:
               367-706
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 88
               

               Conread position:
               420-707
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 98
               

               Conread position:
               421-706
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               58, 244
               

               Conread position:
               421-707
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               422-690
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               459-708
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               463-707
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               481-707
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 158
               

               Conread position:
               573-707
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 106
               
Show alignments to all cow chromosomes.