Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063E11.3
        

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1-540
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               1-570
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 170
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 95
               

               Conread position:
               1-686
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               1-700
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 127
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 116
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 195
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 133
               

               Conread position:
               4-673
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 239
               

               Conread position:
               4-707
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 526
               

               Conread position:
               5-312
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               34, 139
               

               Conread position:
               5-409
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               36, 117
               

               Conread position:
               9-703
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 95
               

               Conread position:
               13-433
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               288
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               33, 122
               

               Conread position:
               14-707
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 117
               

               Conread position:
               45-698
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               99-572
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               319
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               17, 46
               

               Conread position:
               124-707
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               128-525
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               128-672
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               128-703
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               156-707
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 8
               

               Conread position:
               156-707
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               158-389
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               197, 34
               

               Conread position:
               158-413
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 51
               

               Conread position:
               158-591
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 156
               

               Conread position:
               162-707
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 343
               

               Conread position:
               162-707
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               164-707
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               361
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               150, 26
               

               Conread position:
               164-707
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 54
               

               Conread position:
               172-706
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 89
               

               Conread position:
               172-707
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 528
               

               Conread position:
               172-708
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               370
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               189-707
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 331
               

               Conread position:
               209-707
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 252
               

               Conread position:
               213-707
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               218-707
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 359
               

               Conread position:
               221-707
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 269
               

               Conread position:
               225-707
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               225-707
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               227-688
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 158
               

               Conread position:
               228-561
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               228-678
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 179
               

               Conread position:
               228-707
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               341
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               86, 44
               

               Conread position:
               236-625
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               79, 251
               

               Conread position:
               253-688
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               289
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               52, 124
               

               Conread position:
               307-707
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               317-542
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 5
               

               Conread position:
               324-707
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               354-707
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               354-707
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 154
               

               Conread position:
               360-669
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 105
               

               Conread position:
               409-707
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               89, 48
               

               Conread position:
               415-688
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               420-707
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               156, 78
               

               Conread position:
               421-566
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               421-707
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               77, 111
               

               Conread position:
               421-707
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 107
               

               Conread position:
               421-707
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               454-707
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 7
               

               Conread position:
               466-686
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               478-707
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               504-707
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               532-707
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               539-707
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               542-707
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               547-708
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               558-707
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               577-707
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               111, 72
               
Show alignments to all cow chromosomes.