Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063E11.3
        

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 132
               

               Conread position:
               1-311
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               1-354
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 132
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 164
               

               Conread position:
               1-680
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 136
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 129
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 97
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 132
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 205
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 127
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 167
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 207
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 133
               

               Conread position:
               5-413
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 159
               

               Conread position:
               5-510
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 151
               

               Conread position:
               6-707
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 113
               

               Conread position:
               7-575
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 156
               

               Conread position:
               7-637
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 149
               

               Conread position:
               7-668
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 91
               

               Conread position:
               7-707
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 126
               

               Conread position:
               29-707
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 117
               

               Conread position:
               94-288
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               101-707
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               415
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               124-682
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 85
               

               Conread position:
               128-636
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               134-707
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 77
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               158-510
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               158-523
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               193, 155
               

               Conread position:
               158-703
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               158-703
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 40
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 32
               

               Conread position:
               163-365
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               37, 45
               

               Conread position:
               165-655
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               165-707
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 42
               

               Conread position:
               181-692
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               183-707
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               194-707
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 280
               

               Conread position:
               205-707
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               335
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               214-707
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 58
               

               Conread position:
               214-707
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 435
               

               Conread position:
               217-661
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 42
               

               Conread position:
               221-707
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 170
               

               Conread position:
               225-707
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               225-707
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 121
               

               Conread position:
               225-708
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 81
               

               Conread position:
               275-707
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               301-591
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               321-707
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               368-639
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               417-656
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               417-698
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               81, 101
               

               Conread position:
               419-707
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 79
               

               Conread position:
               423-707
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               450-688
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 71
               

               Conread position:
               461-703
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               115, 38
               

               Conread position:
               526-686
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               543-707
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               571-707
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 0
               
Show alignments to all cow chromosomes.