Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-268
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 70, 53

Conread position: 1-303
Cow position:
Alignm length: 307
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 134

Conread position: 1-351
Cow position:
Alignm length: 370
Alignm identity: 250
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 40, 177

Conread position: 1-353
Cow position:
Alignm length: 365
Alignm identity: 245
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 74

Conread position: 1-413
Cow position:
Alignm length: 427
Alignm identity: 286
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 52, 134

Conread position: 1-427
Cow position:
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 1-507
Cow position:
Alignm length: 530
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 24

Conread position: 1-525
Cow position:
Alignm length: 535
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 50

Conread position: 1-530
Cow position:
Alignm length: 556
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-634
Cow position:
Alignm length: 659
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 41

Conread position: 1-636
Cow position:
Alignm length: 663
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 171

Conread position: 1-636
Cow position:
Alignm length: 680
Alignm identity: 432
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 70, 563

Conread position: 1-658
Cow position:
Alignm length: 691
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-682
Cow position:
Alignm length: 709
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 1-683
Cow position:
Alignm length: 700
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 190

Conread position: 1-698
Cow position:
Alignm length: 749
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 250

Conread position: 1-703
Cow position:
Alignm length: 733
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 55

Conread position: 1-707
Cow position:
Alignm length: 749
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 148

Conread position: 1-707
Cow position:
Alignm length: 744
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 169

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 134

Conread position: 1-707
Cow position:
Alignm length: 735
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 750
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 424

Conread position: 1-707
Cow position:
Alignm length: 727
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 761
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 327

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-707
Cow position:
Alignm length: 746
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 132

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 114

Conread position: 1-707
Cow position:
Alignm length: 725
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 125

Conread position: 1-707
Cow position:
Alignm length: 730
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 1-707
Cow position:
Alignm length: 736
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 133

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 1-707
Cow position:
Alignm length: 721
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 50

Conread position: 1-708
Cow position:
Alignm length: 744
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 135

Conread position: 1-708
Cow position:
Alignm length: 738
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 193

Conread position: 1-708
Cow position:
Alignm length: 721
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 78

Conread position: 1-708
Cow position:
Alignm length: 743
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 192

Conread position: 1-708
Cow position:
Alignm length: 741
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 167

Conread position: 2-707
Cow position:
Alignm length: 739
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 131

Conread position: 2-707
Cow position:
Alignm length: 735
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 207

Conread position: 3-400
Cow position:
Alignm length: 412
Alignm identity: 260
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 27

Conread position: 3-707
Cow position:
Alignm length: 736
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 220

Conread position: 4-413
Cow position:
Alignm length: 423
Alignm identity: 280
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 116

Conread position: 4-444
Cow position:
Alignm length: 456
Alignm identity: 293
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 159

Conread position: 4-706
Cow position:
Alignm length: 728
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 4-707
Cow position:
Alignm length: 732
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 26

Conread position: 4-707
Cow position:
Alignm length: 741
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 33

Conread position: 5-675
Cow position:
Alignm length: 699
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 6-680
Cow position:
Alignm length: 695
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 39

Conread position: 7-598
Cow position:
Alignm length: 617
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 126

Conread position: 7-706
Cow position:
Alignm length: 729
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 44

Conread position: 7-707
Cow position:
Alignm length: 721
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 7-707
Cow position:
Alignm length: 726
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 126

Conread position: 13-604
Cow position:
Alignm length: 619
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 122

Conread position: 16-708
Cow position:
Alignm length: 730
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 96

Conread position: 27-707
Cow position:
Alignm length: 708
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 18

Conread position: 52-707
Cow position:
Alignm length: 684
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 108

Conread position: 65-707
Cow position:
Alignm length: 673
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 65

Conread position: 97-707
Cow position:
Alignm length: 640
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 162

Conread position: 99-700
Cow position:
Alignm length: 626
Alignm identity: 398
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 28, 69

Conread position: 128-496
Cow position:
Alignm length: 371
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 243, 35

Conread position: 128-703
Cow position:
Alignm length: 600
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 59

Conread position: 128-703
Cow position:
Alignm length: 604
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 610
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 616
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 606
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 605
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 128-707
Cow position:
Alignm length: 603
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 129-679
Cow position:
Alignm length: 576
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 138-707
Cow position:
Alignm length: 604
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 138-707
Cow position:
Alignm length: 594
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 62

Conread position: 138-708
Cow position:
Alignm length: 595
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 157-510
Cow position:
Alignm length: 377
Alignm identity: 251
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 52

Conread position: 157-707
Cow position:
Alignm length: 579
Alignm identity: 375
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 74, 68

Conread position: 158-636
Cow position:
Alignm length: 510
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 576
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 490

Conread position: 158-707
Cow position:
Alignm length: 577
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 158-707
Cow position:
Alignm length: 580
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 49

Conread position: 158-707
Cow position:
Alignm length: 574
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 158-707
Cow position:
Alignm length: 564
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 158-707
Cow position:
Alignm length: 584
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 159-707
Cow position:
Alignm length: 565
Alignm identity: 359
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 21, 37

Conread position: 160-707
Cow position:
Alignm length: 559
Alignm identity: 360
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 149, 47

Conread position: 163-701
Cow position:
Alignm length: 555
Alignm identity: 347
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 83, 26

Conread position: 164-625
Cow position:
Alignm length: 492
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 236

Conread position: 164-708
Cow position:
Alignm length: 565
Alignm identity: 356
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 39, 20

Conread position: 165-375
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 150, 60

Conread position: 165-540
Cow position:
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 16

Conread position: 165-707
Cow position:
Alignm length: 582
Alignm identity: 387
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 159, 20

Conread position: 170-707
Cow position:
Alignm length: 565
Alignm identity: 365
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 99, 144

Conread position: 172-628
Cow position:
Alignm length: 482
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 35

Conread position: 172-697
Cow position:
Alignm length: 555
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 56

Conread position: 172-706
Cow position:
Alignm length: 559
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 35

Conread position: 172-707
Cow position:
Alignm length: 554
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 172-708
Cow position:
Alignm length: 555
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 56

Conread position: 174-707
Cow position:
Alignm length: 570
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 52

Conread position: 180-510
Cow position:
Alignm length: 346
Alignm identity: 234
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 171, 0

Conread position: 181-707
Cow position:
Alignm length: 556
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 188-707
Cow position:
Alignm length: 543
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 211

Conread position: 192-703
Cow position:
Alignm length: 522
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 34

Conread position: 207-413
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 109, 30

Conread position: 213-707
Cow position:
Alignm length: 515
Alignm identity: 324
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 108, 97

Conread position: 214-707
Cow position:
Alignm length: 524
Alignm identity: 346
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 100, 31

Conread position: 214-707
Cow position:
Alignm length: 523
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 214-707
Cow position:
Alignm length: 520
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 307

Conread position: 221-708
Cow position:
Alignm length: 514
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 28

Conread position: 227-707
Cow position:
Alignm length: 514
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 228-707
Cow position:
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 42

Conread position: 236-707
Cow position:
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 269

Conread position: 241-707
Cow position:
Alignm length: 498
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 7

Conread position: 272-687
Cow position:
Alignm length: 433
Alignm identity: 274
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 37

Conread position: 324-587
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 186

Conread position: 324-707
Cow position:
Alignm length: 402
Alignm identity: 272
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 354-661
Cow position:
Alignm length: 316
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 31

Conread position: 354-707
Cow position:
Alignm length: 374
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 365-707
Cow position:
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 366-686
Cow position:
Alignm length: 322
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 55

Conread position: 383-698
Cow position:
Alignm length: 325
Alignm identity: 236
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 118

Conread position: 388-707
Cow position:
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 56

Conread position: 407-707
Cow position:
Alignm length: 313
Alignm identity: 203
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 141

Conread position: 407-707
Cow position:
Alignm length: 305
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 56

Conread position: 409-707
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 210

Conread position: 413-686
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 87, 98

Conread position: 416-698
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 82, 112

Conread position: 416-707
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 82, 45

Conread position: 420-686
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 102, 79

Conread position: 420-707
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 24

Conread position: 420-707
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 78, 215

Conread position: 421-707
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 72, 119

Conread position: 421-707
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 16

Conread position: 426-701
Cow position:
Alignm length: 284
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 208

Conread position: 433-707
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 66, 142

Conread position: 446-703
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 113

Conread position: 452-660
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 47

Conread position: 460-707
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 0

Conread position: 487-707
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 142, 13

Conread position: 547-707
Cow position:
Alignm length: 162
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 143, 0

Conread position: 571-686
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 0

Show alignments to all cow chromosomes.