Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063E11.3
        

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 82
               

               Conread position:
               1-413
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               327
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               20, 205
               

               Conread position:
               1-621
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 139
               

               Conread position:
               1-651
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               1-661
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               436
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               91, 49
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               439
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               33, 158
               

               Conread position:
               1-694
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 82
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               466
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               1-700
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 100
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 132
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 103
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               2-610
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 169
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 145
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 133
               

               Conread position:
               5-409
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               7-575
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               364
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               9-707
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 119
               

               Conread position:
               42-686
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               427
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               71-509
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               128-410
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               128-413
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               152-687
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               347
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               167, 158
               

               Conread position:
               156-708
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               363
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               155, 49
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               159-403
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               159-567
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               276
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               162-707
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               164-688
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               352
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               165-658
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               336
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               13, 44
               

               Conread position:
               165-707
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               165-707
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               367
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               163, 23
               

               Conread position:
               172-707
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 354
               

               Conread position:
               200-680
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 294
               

               Conread position:
               207-707
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               209-620
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               298
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               214-650
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 77
               

               Conread position:
               214-707
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 267
               

               Conread position:
               215-707
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 168
               

               Conread position:
               218-493
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               220-707
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 135
               

               Conread position:
               228-655
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               138, 67
               

               Conread position:
               230-708
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               236-707
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               318-573
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               413-707
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               416-698
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               209, 71
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               81, 59
               

               Conread position:
               421-707
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 107
               

               Conread position:
               434-636
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               448-707
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 80
               

               Conread position:
               461-707
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               117, 44
               

               Conread position:
               467-703
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               14, 216
               

               Conread position:
               521-707
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 155
               
Show alignments to all cow chromosomes.