Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-588
Cow position:
Alignm length: 626
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 92

Conread position: 1-601
Cow position:
Alignm length: 624
Alignm identity: 385
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 87

Conread position: 1-681
Cow position:
Alignm length: 704
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 62

Conread position: 1-698
Cow position:
Alignm length: 731
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-698
Cow position:
Alignm length: 731
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-698
Cow position:
Alignm length: 726
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-698
Cow position:
Alignm length: 731
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 78

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 132

Conread position: 1-707
Cow position:
Alignm length: 736
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 225

Conread position: 1-707
Cow position:
Alignm length: 728
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 134

Conread position: 1-708
Cow position:
Alignm length: 727
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 236

Conread position: 2-495
Cow position:
Alignm length: 513
Alignm identity: 330
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 131

Conread position: 2-679
Cow position:
Alignm length: 710
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 168

Conread position: 2-686
Cow position:
Alignm length: 715
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 197

Conread position: 4-707
Cow position:
Alignm length: 735
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 89

Conread position: 4-708
Cow position:
Alignm length: 743
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 199

Conread position: 5-317
Cow position:
Alignm length: 322
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 185

Conread position: 5-698
Cow position:
Alignm length: 710
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 12

Conread position: 7-331
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 91

Conread position: 7-688
Cow position:
Alignm length: 705
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 73

Conread position: 7-706
Cow position:
Alignm length: 723
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 155

Conread position: 9-707
Cow position:
Alignm length: 722
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 124

Conread position: 16-496
Cow position:
Alignm length: 505
Alignm identity: 330
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 23, 130

Conread position: 26-341
Cow position:
Alignm length: 326
Alignm identity: 231
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 23, 171

Conread position: 45-707
Cow position:
Alignm length: 690
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 80

Conread position: 122-708
Cow position:
Alignm length: 615
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 55

Conread position: 126-707
Cow position:
Alignm length: 613
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 84

Conread position: 128-634
Cow position:
Alignm length: 539
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-669
Cow position:
Alignm length: 567
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-703
Cow position:
Alignm length: 606
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 128-707
Cow position:
Alignm length: 614
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 128-707
Cow position:
Alignm length: 607
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 609
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-708
Cow position:
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 130-413
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 49

Conread position: 151-707
Cow position:
Alignm length: 591
Alignm identity: 371
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 80

Conread position: 152-629
Cow position:
Alignm length: 496
Alignm identity: 325
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 85, 12

Conread position: 158-572
Cow position:
Alignm length: 435
Alignm identity: 284
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 50

Conread position: 158-601
Cow position:
Alignm length: 465
Alignm identity: 276
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 573
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 578
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 158-707
Cow position:
Alignm length: 578
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 576
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 51

Conread position: 164-675
Cow position:
Alignm length: 544
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 54

Conread position: 164-707
Cow position:
Alignm length: 577
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 365

Conread position: 172-350
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 154, 39

Conread position: 172-707
Cow position:
Alignm length: 574
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 35

Conread position: 172-707
Cow position:
Alignm length: 561
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 56

Conread position: 172-708
Cow position:
Alignm length: 568
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 175

Conread position: 175-707
Cow position:
Alignm length: 563
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 84

Conread position: 196-707
Cow position:
Alignm length: 540
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 80

Conread position: 196-707
Cow position:
Alignm length: 540
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 27

Conread position: 207-707
Cow position:
Alignm length: 510
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 40

Conread position: 214-703
Cow position:
Alignm length: 521
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 56

Conread position: 218-707
Cow position:
Alignm length: 512
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 146

Conread position: 225-707
Cow position:
Alignm length: 502
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 69

Conread position: 237-707
Cow position:
Alignm length: 500
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 251-677
Cow position:
Alignm length: 448
Alignm identity: 295
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 79, 44

Conread position: 312-549
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 8

Conread position: 416-701
Cow position:
Alignm length: 292
Alignm identity: 192
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 89, 9

Conread position: 416-707
Cow position:
Alignm length: 302
Alignm identity: 208
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 82, 73

Conread position: 419-686
Cow position:
Alignm length: 274
Alignm identity: 200
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 152, 79

Conread position: 421-708
Cow position:
Alignm length: 300
Alignm identity: 205
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 35, 138

Conread position: 425-708
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 80, 254

Conread position: 426-707
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 8

Conread position: 426-708
Cow position:
Alignm length: 290
Alignm identity: 210
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 72, 14

Conread position: 433-707
Cow position:
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 497-707
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 542-707
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Show alignments to all cow chromosomes.