Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063E11.3
        

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               132, 51
               

               Conread position:
               1-686
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 126
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 92
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 95
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 130
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               451
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               48, 158
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 67
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 92
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 132
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 86
               

               Conread position:
               5-688
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               7-707
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               12-310
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 123
               

               Conread position:
               12-511
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 501
               

               Conread position:
               13-708
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 120
               

               Conread position:
               17-413
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               70-482
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               283
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               122-609
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 41
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               138-707
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               160-413
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               161, 154
               

               Conread position:
               165-707
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 30
               

               Conread position:
               168-413
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               172-545
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               235, 35
               

               Conread position:
               172-688
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               172-707
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 236
               

               Conread position:
               181-575
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               273
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               138, 131
               

               Conread position:
               186-707
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               192-698
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               196-708
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 325
               

               Conread position:
               209-510
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               222-707
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               334
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               104, 240
               

               Conread position:
               225-683
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 129
               

               Conread position:
               228-686
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 79
               

               Conread position:
               233-707
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 490
               

               Conread position:
               267-575
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               317-707
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 321
               

               Conread position:
               317-707
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 283
               

               Conread position:
               324-510
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               332-707
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 364
               

               Conread position:
               354-707
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               354-707
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               413-707
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               266, 56
               

               Conread position:
               416-635
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 164
               

               Conread position:
               416-702
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               39, 225
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               81, 200
               

               Conread position:
               420-707
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               423-681
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 155
               

               Conread position:
               449-707
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               476-707
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               481-707
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               506-707
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               524-707
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 18
               
Show alignments to all cow chromosomes.