Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063E11.3
        

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-413
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 36
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               370
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               61, 134
               

               Conread position:
               1-634
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 138
               

               Conread position:
               1-686
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 87
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 214
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 132
               

               Conread position:
               2-687
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 595
               

               Conread position:
               2-703
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 131
               

               Conread position:
               2-708
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 131
               

               Conread position:
               5-414
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               279
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               87, 65
               

               Conread position:
               5-620
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 112
               

               Conread position:
               5-707
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               6-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 131
               

               Conread position:
               7-697
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 202
               

               Conread position:
               8-707
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               13-697
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 122
               

               Conread position:
               28-708
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               53-708
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               415
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               164, 51
               

               Conread position:
               99-707
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               100-696
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               385
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               25, 51
               

               Conread position:
               123-707
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 87
               

               Conread position:
               127-707
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 83
               

               Conread position:
               128-413
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 83
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               141-683
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               354
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               156-452
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               168, 24
               

               Conread position:
               158-414
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               158-678
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               158-683
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 38
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               158-708
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               160-707
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 161
               

               Conread position:
               164-688
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 347
               

               Conread position:
               168-684
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               353
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               65, 378
               

               Conread position:
               168-707
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 38
               

               Conread position:
               193-706
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 123
               

               Conread position:
               209-573
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               105, 42
               

               Conread position:
               214-707
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 46
               

               Conread position:
               218-707
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 331
               

               Conread position:
               221-450
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               225-707
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 122
               

               Conread position:
               236-627
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 226
               

               Conread position:
               316-707
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               317-707
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               318-680
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 325
               

               Conread position:
               366-686
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               367-707
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 9
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               82, 191
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               420-707
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               78, 69
               

               Conread position:
               421-707
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               58, 199
               

               Conread position:
               446-650
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               157, 52
               

               Conread position:
               449-707
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 230
               

               Conread position:
               454-663
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               463-707
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               35, 23
               

               Conread position:
               473-701
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 162
               

               Conread position:
               538-707
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               572-707
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 0
               
Show alignments to all cow chromosomes.