Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063E11.3
        

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-495
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 51
               

               Conread position:
               1-561
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-561
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               381
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               45, 100
               

               Conread position:
               1-676
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               436
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               1-686
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 82
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 114
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-699
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-699
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 132
               

               Conread position:
               1-703
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 198
               

               Conread position:
               1-706
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-706
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 87
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 222
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 135
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 129
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 72
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               2-598
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               2-652
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 196
               

               Conread position:
               2-689
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 136
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               2-707
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 142
               

               Conread position:
               3-351
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 132
               

               Conread position:
               3-511
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 97
               

               Conread position:
               4-707
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 124
               

               Conread position:
               5-592
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               5-698
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 204
               

               Conread position:
               5-707
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               477
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               39, 76
               

               Conread position:
               7-440
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 150
               

               Conread position:
               14-193
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               18-707
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 116
               

               Conread position:
               19-303
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               70-363
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               241, 61
               

               Conread position:
               128-369
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               128-707
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               154-688
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               343
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 432
               

               Conread position:
               158-703
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               172-625
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 351
               

               Conread position:
               172-707
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 206
               

               Conread position:
               172-708
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 88
               

               Conread position:
               196-707
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 13
               

               Conread position:
               214-707
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 18
               

               Conread position:
               214-707
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 281
               

               Conread position:
               225-665
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               225-707
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 126
               

               Conread position:
               229-707
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 178
               

               Conread position:
               240-707
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 74
               

               Conread position:
               252-707
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               291-706
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               292-508
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               125, 41
               

               Conread position:
               354-617
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               58, 39
               

               Conread position:
               354-684
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               58, 239
               

               Conread position:
               354-707
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               416-698
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               154, 65
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               82, 216
               

               Conread position:
               416-707
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               417-708
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               421-707
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               76, 63
               

               Conread position:
               422-686
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               427-708
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               34, 77
               

               Conread position:
               473-707
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               505-707
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               30, 74
               

               Conread position:
               539-707
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               541-707
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               547-707
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               143, 90
               

               Conread position:
               600-707
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               90, 71
               
Show alignments to all cow chromosomes.