Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063E11.3 |
| Conread position: | 1-329 |
| Cow position: | chr3:53515032-53515356 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 1-428 |
| Cow position: | chr3:19801718-19802154 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 1-496 |
| Cow position: | chr3:49309360-49308873 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 1-573 |
| Cow position: | chr3:56650957-56650380 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 1-575 |
| Cow position: | chr3:2909785-2909204 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 176 |
| Conread position: | 1-576 |
| Cow position: | chr3:19692785-19692203 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 91 |
| Conread position: | 1-624 |
| Cow position: | chr3:47273666-47273048 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 1-626 |
| Cow position: | chr3:39325997-39326631 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 126 |
| Conread position: | 1-627 |
| Cow position: | chr3:49677047-49677702 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 373 |
| Conread position: | 1-698 |
| Cow position: | chr3:21183377-21182664 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 1-698 |
| Cow position: | chr3:23292106-23291387 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 1-698 |
| Cow position: | chr3:34031598-34030879 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 1-698 |
| Cow position: | chr3:42630299-42631034 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 481 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 1-698 |
| Cow position: | chr3:43040388-43039686 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 1-698 |
| Cow position: | chr3:48061524-48060812 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-698 |
| Cow position: | chr3:56341139-56340407 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-706 |
| Cow position: | chr3:3053921-3054626 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 23 |
| Conread position: | 1-706 |
| Cow position: | chr3:14634788-14634084 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 199 |
| Conread position: | 1-707 |
| Cow position: | chr3:593897-594604 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 1-707 |
| Cow position: | chr3:2633238-2633954 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 132 |
| Conread position: | 1-707 |
| Cow position: | chr3:5882838-5883568 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr3:5954870-5954157 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 1-707 |
| Cow position: | chr3:6684756-6685490 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 132 |
| Conread position: | 1-707 |
| Cow position: | chr3:10238951-10239678 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 103 |
| Conread position: | 1-707 |
| Cow position: | chr3:15177615-15178340 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 206 |
| Conread position: | 1-707 |
| Cow position: | chr3:18810802-18811532 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr3:30928984-30929672 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 446 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 77 |
| Conread position: | 1-707 |
| Cow position: | chr3:36882611-36881893 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 112 |
| Conread position: | 1-707 |
| Cow position: | chr3:37968355-37969108 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 538 |
| Conread position: | 1-707 |
| Cow position: | chr3:38865705-38866424 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 1-707 |
| Cow position: | chr3:40822670-40823416 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 169 |
| Conread position: | 1-707 |
| Cow position: | chr3:59860662-59861395 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 1-707 |
| Cow position: | chr3:64018064-64017335 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 1-707 |
| Cow position: | chr3:64358873-64358141 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 294 |
| Conread position: | 1-707 |
| Cow position: | chr3:69932699-69933423 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr3:72629370-72630098 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 1-707 |
| Cow position: | chr3:75041848-75041139 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr3:78028113-78027381 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-708 |
| Cow position: | chr3:57485424-57484699 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 2-340 |
| Cow position: | chr3:46502323-46502670 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 131 |
| Conread position: | 2-413 |
| Cow position: | chr3:5996573-5996153 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 133 |
| Conread position: | 2-615 |
| Cow position: | chr3:58208783-58208161 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 409 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 2-706 |
| Cow position: | chr3:24592309-24591615 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 3-353 |
| Cow position: | chr3:17950965-17951312 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 46, 85 |
| Conread position: | 5-533 |
| Cow position: | chr3:52865455-52864901 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 380 |
| Conread position: | 5-669 |
| Cow position: | chr3:32843125-32842444 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 162 |
| Conread position: | 5-707 |
| Cow position: | chr3:21946102-21945378 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 128 |
| Conread position: | 6-706 |
| Cow position: | chr3:54782863-54783567 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 444 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 42, 149 |
| Conread position: | 7-350 |
| Cow position: | chr3:66637363-66637697 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 7-707 |
| Cow position: | chr3:9716129-9716843 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 125 |
| Conread position: | 7-707 |
| Cow position: | chr3:18357568-18356858 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 7-708 |
| Cow position: | chr3:55230378-55229671 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 126 |
| Conread position: | 9-222 |
| Cow position: | chr3:54865405-54865190 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 81 |
| Conread position: | 13-707 |
| Cow position: | chr3:2711645-2710932 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 25-341 |
| Cow position: | chr3:18464436-18464117 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 26-707 |
| Cow position: | chr3:57500203-57499495 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 149 |
| Conread position: | 38-665 |
| Cow position: | chr3:36099374-36098719 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 38-706 |
| Cow position: | chr3:50128536-50127852 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 42-708 |
| Cow position: | chr3:65584255-65583593 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 437 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 54-687 |
| Cow position: | chr3:53410293-53410920 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 62-615 |
| Cow position: | chr3:49545806-49545244 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 366 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 70-707 |
| Cow position: | chr3:3979755-3980419 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 147 |
| Conread position: | 127-681 |
| Cow position: | chr3:63005719-63005144 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 128-413 |
| Cow position: | chr3:36117086-36117378 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-525 |
| Cow position: | chr3:40340541-40340123 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 128-653 |
| Cow position: | chr3:72704617-72705172 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-680 |
| Cow position: | chr3:4285308-4285887 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 128-703 |
| Cow position: | chr3:47082224-47081633 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 80 |
| Conread position: | 128-707 |
| Cow position: | chr3:2916889-2917490 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 128-707 |
| Cow position: | chr3:3522434-3523050 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-707 |
| Cow position: | chr3:15989608-15989006 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 128-707 |
| Cow position: | chr3:17829227-17828620 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-707 |
| Cow position: | chr3:32146663-32146061 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 128-707 |
| Cow position: | chr3:46678493-46677885 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 128-707 |
| Cow position: | chr3:64028663-64028057 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-707 |
| Cow position: | chr3:64650044-64650654 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 196 |
| Conread position: | 138-707 |
| Cow position: | chr3:66891524-66890932 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 178 |
| Conread position: | 151-707 |
| Cow position: | chr3:46861853-46861274 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 151-707 |
| Cow position: | chr3:54865240-54864670 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 154-707 |
| Cow position: | chr3:16072618-16073166 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 351 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 59 |
| Conread position: | 157-510 |
| Cow position: | chr3:50208814-50209187 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 25, 194 |
| Conread position: | 158-655 |
| Cow position: | chr3:32623551-32623045 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 334 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 158-665 |
| Cow position: | chr3:48231516-48231017 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 30 |
| Conread position: | 158-707 |
| Cow position: | chr3:14440275-14439732 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 374 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 159, 227 |
| Conread position: | 158-707 |
| Cow position: | chr3:19878116-19878687 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 158-707 |
| Cow position: | chr3:19938365-19938914 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 391 |
| Conread position: | 158-707 |
| Cow position: | chr3:22335351-22335917 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 158-707 |
| Cow position: | chr3:24313930-24314498 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 158-707 |
| Cow position: | chr3:49614520-49613948 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 49 |
| Conread position: | 158-707 |
| Cow position: | chr3:57856188-57856766 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 159-707 |
| Cow position: | chr3:30314013-30314595 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 160-687 |
| Cow position: | chr3:17936610-17936057 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 343 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 44, 331 |
| Conread position: | 162-707 |
| Cow position: | chr3:5830171-5829599 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 393 |
| Conread position: | 162-707 |
| Cow position: | chr3:66119107-66119684 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 114 |
| Conread position: | 163-707 |
| Cow position: | chr3:18542953-18542379 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 498 |
| Conread position: | 163-707 |
| Cow position: | chr3:42431696-42432260 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 43 |
| Conread position: | 164-410 |
| Cow position: | chr3:13513743-13513490 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 164-707 |
| Cow position: | chr3:3805831-3806368 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 164-707 |
| Cow position: | chr3:41212281-41211708 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 165-707 |
| Cow position: | chr3:42580503-42579938 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 165-708 |
| Cow position: | chr3:45775608-45775058 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 112 |
| Conread position: | 166-707 |
| Cow position: | chr3:6781850-6782413 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 171-707 |
| Cow position: | chr3:45032206-45032770 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 172-655 |
| Cow position: | chr3:4739429-4738966 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 319 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 183, 12 |
| Conread position: | 172-707 |
| Cow position: | chr3:207694-207132 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 172-707 |
| Cow position: | chr3:31354786-31354236 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 172-707 |
| Cow position: | chr3:77474234-77474789 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 35 |
| Conread position: | 174-706 |
| Cow position: | chr3:36126871-36127419 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 90 |
| Conread position: | 181-707 |
| Cow position: | chr3:60210690-60210145 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 115 |
| Conread position: | 189-707 |
| Cow position: | chr3:70084154-70083623 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 196-707 |
| Cow position: | chr3:472045-472561 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 25 |
| Conread position: | 196-707 |
| Cow position: | chr3:2653611-2654135 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 107 |
| Conread position: | 209-566 |
| Cow position: | chr3:36691687-36691311 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 214-707 |
| Cow position: | chr3:5047676-5047155 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 129 |
| Conread position: | 214-707 |
| Cow position: | chr3:31898461-31897948 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 60 |
| Conread position: | 218-707 |
| Cow position: | chr3:19943591-19944086 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 166 |
| Conread position: | 225-698 |
| Cow position: | chr3:19757441-19756939 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 225-707 |
| Cow position: | chr3:56320829-56321345 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 290 |
| Conread position: | 228-707 |
| Cow position: | chr3:47179682-47179174 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 499 |
| Conread position: | 237-707 |
| Cow position: | chr3:45869661-45869188 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 313 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 77, 132 |
| Conread position: | 242-706 |
| Cow position: | chr3:26949052-26949542 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 54 |
| Conread position: | 274-708 |
| Cow position: | chr3:50914878-50915334 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 317-707 |
| Cow position: | chr3:51940788-51940391 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 271 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 168 |
| Conread position: | 324-703 |
| Cow position: | chr3:80871532-80871920 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 31, 167 |
| Conread position: | 334-707 |
| Cow position: | chr3:18463941-18463558 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 335-707 |
| Cow position: | chr3:14754648-14754268 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 165 |
| Conread position: | 335-708 |
| Cow position: | chr3:4026911-4027301 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 182 |
| Conread position: | 354-707 |
| Cow position: | chr3:18729475-18729112 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 58, 95 |
| Conread position: | 360-707 |
| Cow position: | chr3:63242062-63241726 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 361-708 |
| Cow position: | chr3:66990467-66990816 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 116 |
| Conread position: | 365-683 |
| Cow position: | chr3:56097208-56097533 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 187 |
| Conread position: | 369-625 |
| Cow position: | chr3:24642040-24642288 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 117 |
| Conread position: | 409-707 |
| Cow position: | chr3:29594927-29595223 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 59 |
| Conread position: | 420-707 |
| Cow position: | chr3:58947190-58947487 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 420-707 |
| Cow position: | chr3:66638474-66638769 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 421-680 |
| Cow position: | chr3:36117411-36117677 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 421-707 |
| Cow position: | chr3:5995960-5995668 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 421-707 |
| Cow position: | chr3:7168531-7168822 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 75, 260 |
| Conread position: | 421-707 |
| Cow position: | chr3:18859158-18859445 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 422-707 |
| Cow position: | chr3:7158994-7158703 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 106 |
| Conread position: | 425-707 |
| Cow position: | chr3:53515359-53515642 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 73, 7 |
| Conread position: | 429-688 |
| Cow position: | chr3:42445323-42445072 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 429-701 |
| Cow position: | chr3:17775842-17776109 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 69, 77 |
| Conread position: | 429-707 |
| Cow position: | chr3:21305422-21305152 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 432-707 |
| Cow position: | chr3:49333146-49333416 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 98 |
| Conread position: | 435-707 |
| Cow position: | chr3:66619929-66620203 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 497-688 |
| Cow position: | chr3:26822681-26822492 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 517-707 |
| Cow position: | chr3:23214229-23214033 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 146 |
| Conread position: | 521-707 |
| Cow position: | chr3:34093607-34093419 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 532-707 |
| Cow position: | chr3:39326570-39326746 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 151, 64 |
| Conread position: | 544-708 |
| Cow position: | chr3:13518422-13518251 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 547-707 |
| Cow position: | chr3:49137672-49137511 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 560-707 |
| Cow position: | chr3:49545326-49545178 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 566-707 |
| Cow position: | chr3:45895672-45895529 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 566-707 |
| Cow position: | chr3:45974383-45974526 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 571-703 |
| Cow position: | chr3:52864581-52864448 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 571-707 |
| Cow position: | chr3:40157613-40157477 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 119, 124 |
| Conread position: | 579-707 |
| Cow position: | chr3:68700069-68699940 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 111, 0 |
Show alignments to all cow chromosomes.