Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 276
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 129

Conread position: 1-413
Cow position:
Alignm length: 425
Alignm identity: 281
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 72

Conread position: 1-413
Cow position:
Alignm length: 429
Alignm identity: 286
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 129

Conread position: 1-413
Cow position:
Alignm length: 419
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 134

Conread position: 1-487
Cow position:
Alignm length: 503
Alignm identity: 330
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 40, 100

Conread position: 1-634
Cow position:
Alignm length: 663
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 49

Conread position: 1-686
Cow position:
Alignm length: 718
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-686
Cow position:
Alignm length: 711
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 29

Conread position: 1-686
Cow position:
Alignm length: 718
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-698
Cow position:
Alignm length: 723
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-698
Cow position:
Alignm length: 728
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-698
Cow position:
Alignm length: 728
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-706
Cow position:
Alignm length: 738
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 735
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-707
Cow position:
Alignm length: 735
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-707
Cow position:
Alignm length: 743
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 743
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 127

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 132

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 736
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 46

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-708
Cow position:
Alignm length: 734
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 103

Conread position: 1-708
Cow position:
Alignm length: 738
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 135

Conread position: 2-353
Cow position:
Alignm length: 375
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 43

Conread position: 2-405
Cow position:
Alignm length: 418
Alignm identity: 273
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 88

Conread position: 2-612
Cow position:
Alignm length: 647
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 2-687
Cow position:
Alignm length: 702
Alignm identity: 432
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 49, 126

Conread position: 2-697
Cow position:
Alignm length: 731
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 3-707
Cow position:
Alignm length: 738
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 188

Conread position: 4-707
Cow position:
Alignm length: 730
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 127

Conread position: 5-706
Cow position:
Alignm length: 741
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 5-707
Cow position:
Alignm length: 722
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 43

Conread position: 6-707
Cow position:
Alignm length: 716
Alignm identity: 448
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 55, 169

Conread position: 7-707
Cow position:
Alignm length: 731
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 44

Conread position: 9-703
Cow position:
Alignm length: 728
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 91

Conread position: 17-707
Cow position:
Alignm length: 724
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 118

Conread position: 71-707
Cow position:
Alignm length: 666
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 123-707
Cow position:
Alignm length: 606
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 51

Conread position: 127-707
Cow position:
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 73

Conread position: 128-413
Cow position:
Alignm length: 297
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 82

Conread position: 128-573
Cow position:
Alignm length: 471
Alignm identity: 305
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 46

Conread position: 128-702
Cow position:
Alignm length: 608
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 608
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 609
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 599
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 617
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 138-707
Cow position:
Alignm length: 604
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 72

Conread position: 138-708
Cow position:
Alignm length: 588
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 141-688
Cow position:
Alignm length: 573
Alignm identity: 358
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 170, 22

Conread position: 143-681
Cow position:
Alignm length: 551
Alignm identity: 329
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 169, 45

Conread position: 156-676
Cow position:
Alignm length: 549
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 403

Conread position: 158-706
Cow position:
Alignm length: 573
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 158-707
Cow position:
Alignm length: 581
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 23

Conread position: 158-707
Cow position:
Alignm length: 582
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 163-508
Cow position:
Alignm length: 366
Alignm identity: 236
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 29

Conread position: 165-629
Cow position:
Alignm length: 479
Alignm identity: 311
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 247, 119

Conread position: 165-692
Cow position:
Alignm length: 545
Alignm identity: 341
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 143, 25

Conread position: 169-533
Cow position:
Alignm length: 374
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 119, 27

Conread position: 172-341
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 161, 0

Conread position: 172-707
Cow position:
Alignm length: 551
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 125

Conread position: 182-707
Cow position:
Alignm length: 561
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 220

Conread position: 209-707
Cow position:
Alignm length: 528
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 358

Conread position: 259-698
Cow position:
Alignm length: 454
Alignm identity: 279
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 85

Conread position: 316-703
Cow position:
Alignm length: 401
Alignm identity: 263
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 179

Conread position: 317-707
Cow position:
Alignm length: 413
Alignm identity: 279
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 321-575
Cow position:
Alignm length: 274
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 18, 62

Conread position: 324-707
Cow position:
Alignm length: 403
Alignm identity: 275
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 307

Conread position: 326-707
Cow position:
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 344-706
Cow position:
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 357-707
Cow position:
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 180

Conread position: 407-697
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 66

Conread position: 407-706
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 31

Conread position: 407-707
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 163

Conread position: 409-707
Cow position:
Alignm length: 304
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 128, 16

Conread position: 411-703
Cow position:
Alignm length: 295
Alignm identity: 195
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 87, 50

Conread position: 416-707
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 82, 205

Conread position: 423-707
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 178, 49

Conread position: 473-707
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 481-707
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 156

Conread position: 524-703
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 534-707
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 99

Conread position: 552-707
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 572-707
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 0

Show alignments to all cow chromosomes.