Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063E11.3 |
| Conread position: | 1-279 |
| Cow position: | chr5:7503186-7502913 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 126, 65 |
| Conread position: | 1-299 |
| Cow position: | chr5:24151274-24151574 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 48, 164 |
| Conread position: | 1-351 |
| Cow position: | chr5:46006230-46005887 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 1-404 |
| Cow position: | chr5:23688282-23687864 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 1-464 |
| Cow position: | chr5:58747087-58747562 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 132 |
| Conread position: | 1-496 |
| Cow position: | chr5:23716752-23716241 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 100 |
| Conread position: | 1-501 |
| Cow position: | chr5:59281959-59282478 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 1-569 |
| Cow position: | chr5:12682306-12681725 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 167 |
| Conread position: | 1-599 |
| Cow position: | chr5:27000401-27000993 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 169 |
| Conread position: | 1-660 |
| Cow position: | chr5:54793417-54792732 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 1-681 |
| Cow position: | chr5:34695783-34696484 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-686 |
| Cow position: | chr5:30578523-30579228 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 1-688 |
| Cow position: | chr5:61273972-61273274 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 199 |
| Conread position: | 1-698 |
| Cow position: | chr5:24097852-24098568 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 29 |
| Conread position: | 1-703 |
| Cow position: | chr5:32945080-32945798 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 100 |
| Conread position: | 1-705 |
| Cow position: | chr5:32674544-32673817 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 219 |
| Conread position: | 1-707 |
| Cow position: | chr5:416523-415794 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr5:1342598-1341865 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 1-707 |
| Cow position: | chr5:2913648-2914379 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr5:3505043-3504322 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 1-707 |
| Cow position: | chr5:3785012-3785718 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 31 |
| Conread position: | 1-707 |
| Cow position: | chr5:6158995-6158269 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 1-707 |
| Cow position: | chr5:7273068-7273780 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 51 |
| Conread position: | 1-707 |
| Cow position: | chr5:10918001-10918726 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 135 |
| Conread position: | 1-707 |
| Cow position: | chr5:14659900-14659167 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 460 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 1-707 |
| Cow position: | chr5:37731542-37732274 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 1-707 |
| Cow position: | chr5:46739404-46738657 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 1-707 |
| Cow position: | chr5:48809512-48808787 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 137 |
| Conread position: | 1-707 |
| Cow position: | chr5:49120080-49119353 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 133 |
| Conread position: | 1-707 |
| Cow position: | chr5:55627203-55627915 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 1-707 |
| Cow position: | chr5:56858505-56857776 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 1-707 |
| Cow position: | chr5:57483344-57482618 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 2-404 |
| Cow position: | chr5:41963732-41963326 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 43, 157 |
| Conread position: | 2-496 |
| Cow position: | chr5:34167263-34167769 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 151 |
| Conread position: | 2-605 |
| Cow position: | chr5:27488227-27488843 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 2-669 |
| Cow position: | chr5:23227463-23228145 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 50 |
| Conread position: | 2-705 |
| Cow position: | chr5:41530376-41529665 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 2-707 |
| Cow position: | chr5:2430933-2430204 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 2-707 |
| Cow position: | chr5:4068192-4068918 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 50 |
| Conread position: | 2-707 |
| Cow position: | chr5:28006428-28007128 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 131 |
| Conread position: | 2-707 |
| Cow position: | chr5:64782815-64782090 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 113 |
| Conread position: | 5-707 |
| Cow position: | chr5:46631198-46630513 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 17 |
| Conread position: | 7-707 |
| Cow position: | chr5:26769025-26769738 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 147 |
| Conread position: | 7-708 |
| Cow position: | chr5:34202172-34202864 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 24 |
| Conread position: | 10-707 |
| Cow position: | chr5:26090651-26089903 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 160 |
| Conread position: | 20-413 |
| Cow position: | chr5:54619702-54620082 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 27-330 |
| Cow position: | chr5:27060852-27060553 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 40-567 |
| Cow position: | chr5:76124308-76123770 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 358 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 70-477 |
| Cow position: | chr5:6519165-6519577 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 84-703 |
| Cow position: | chr5:49594179-49593531 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 116-698 |
| Cow position: | chr5:61020522-61019925 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 121-686 |
| Cow position: | chr5:27683430-27682864 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 128-413 |
| Cow position: | chr5:23960789-23960493 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-492 |
| Cow position: | chr5:37755820-37755433 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-701 |
| Cow position: | chr5:53714575-53715176 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-707 |
| Cow position: | chr5:2530595-2531199 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 102 |
| Conread position: | 128-707 |
| Cow position: | chr5:3963798-3964392 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 128-707 |
| Cow position: | chr5:4019879-4019270 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 128-707 |
| Cow position: | chr5:10776925-10776336 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 128-707 |
| Cow position: | chr5:14379487-14380091 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 128-707 |
| Cow position: | chr5:26079899-26079290 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-707 |
| Cow position: | chr5:32771801-32772410 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-707 |
| Cow position: | chr5:45182773-45182175 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 128-707 |
| Cow position: | chr5:46775411-46776008 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-707 |
| Cow position: | chr5:48468953-48468351 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 128-707 |
| Cow position: | chr5:59059937-59060545 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 128-707 |
| Cow position: | chr5:59481570-59482182 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 128-708 |
| Cow position: | chr5:47831774-47831182 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 134-707 |
| Cow position: | chr5:58195327-58195930 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 136-707 |
| Cow position: | chr5:18665291-18665890 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 71 |
| Conread position: | 138-493 |
| Cow position: | chr5:52804664-52805041 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 353 |
| Conread position: | 138-669 |
| Cow position: | chr5:10844544-10843985 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 138-686 |
| Cow position: | chr5:31705906-31706482 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 138-707 |
| Cow position: | chr5:27909939-27909344 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 157-573 |
| Cow position: | chr5:30088357-30087934 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 121 |
| Conread position: | 157-682 |
| Cow position: | chr5:58061469-58060936 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 344 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 158-411 |
| Cow position: | chr5:18663598-18663860 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 158-707 |
| Cow position: | chr5:24576265-24576843 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 158-708 |
| Cow position: | chr5:46663356-46663932 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 303 |
| Conread position: | 159-310 |
| Cow position: | chr5:73489974-73489823 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-706 |
| Cow position: | chr5:57366647-57366095 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 364 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 150, 71 |
| Conread position: | 164-668 |
| Cow position: | chr5:49101000-49101506 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 164-698 |
| Cow position: | chr5:6187917-6188480 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 369 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 164-707 |
| Cow position: | chr5:46644067-46644615 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 43 |
| Conread position: | 166-493 |
| Cow position: | chr5:26095102-26095430 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 153, 144 |
| Conread position: | 171-566 |
| Cow position: | chr5:35299427-35299845 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 172-702 |
| Cow position: | chr5:49181651-49182192 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 416 |
| Conread position: | 172-703 |
| Cow position: | chr5:28030858-28031401 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 184 |
| Conread position: | 172-707 |
| Cow position: | chr5:29008730-29009283 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 39 |
| Conread position: | 174-510 |
| Cow position: | chr5:23756210-23755870 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 185-706 |
| Cow position: | chr5:24329672-24330201 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 368 |
| Conread position: | 193-707 |
| Cow position: | chr5:9687021-9686500 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 143 |
| Conread position: | 194-662 |
| Cow position: | chr5:51162304-51162791 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 111, 54 |
| Conread position: | 196-707 |
| Cow position: | chr5:45699670-45700194 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 51 |
| Conread position: | 214-707 |
| Cow position: | chr5:39165391-39164872 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 477 |
| Conread position: | 228-707 |
| Cow position: | chr5:32733822-32733324 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 271 |
| Conread position: | 229-572 |
| Cow position: | chr5:12644453-12644100 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 257 |
| Conread position: | 232-487 |
| Cow position: | chr5:12185085-12185361 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 232-706 |
| Cow position: | chr5:41551498-41551000 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 291 |
| Conread position: | 245-707 |
| Cow position: | chr5:31102155-31101669 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 324 |
| Conread position: | 307-707 |
| Cow position: | chr5:46659228-46659643 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 21, 274 |
| Conread position: | 317-706 |
| Cow position: | chr5:29042028-29042439 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 225 |
| Conread position: | 317-707 |
| Cow position: | chr5:54932701-54932290 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 225 |
| Conread position: | 318-707 |
| Cow position: | chr5:44459000-44459411 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 224 |
| Conread position: | 324-686 |
| Cow position: | chr5:46005860-46005470 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 27, 336 |
| Conread position: | 335-626 |
| Cow position: | chr5:27569686-27570000 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 8, 286 |
| Conread position: | 354-708 |
| Cow position: | chr5:25207183-25206811 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 320 |
| Conread position: | 359-698 |
| Cow position: | chr5:49518227-49518579 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 58, 137 |
| Conread position: | 367-705 |
| Cow position: | chr5:16104195-16103853 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 141 |
| Conread position: | 392-707 |
| Cow position: | chr5:55097104-55096783 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 406-707 |
| Cow position: | chr5:41962615-41962310 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 66 |
| Conread position: | 421-707 |
| Cow position: | chr5:4088438-4088733 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 421-707 |
| Cow position: | chr5:6589387-6589093 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 422-706 |
| Cow position: | chr5:20972369-20972105 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 266, 43 |
| Conread position: | 440-708 |
| Cow position: | chr5:26069060-26068789 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 58, 244 |
| Conread position: | 446-707 |
| Cow position: | chr5:27652318-27652054 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 465-707 |
| Cow position: | chr5:58819956-58819706 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 473-699 |
| Cow position: | chr5:52433663-52433887 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 480-707 |
| Cow position: | chr5:5318063-5317829 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 542-707 |
| Cow position: | chr5:52805123-52805294 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 97 |
| Conread position: | 558-707 |
| Cow position: | chr5:29436185-29436041 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 130, 5 |
| Conread position: | 558-707 |
| Cow position: | chr5:39247604-39247455 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 129, 118 |
| Conread position: | 572-698 |
| Cow position: | chr5:27060453-27060324 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.