Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-279
Cow position:
Alignm length: 282
Alignm identity: 190
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 126, 65

Conread position: 1-299
Cow position:
Alignm length: 306
Alignm identity: 199
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 164

Conread position: 1-351
Cow position:
Alignm length: 352
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 44

Conread position: 1-404
Cow position:
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 1-464
Cow position:
Alignm length: 485
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 132

Conread position: 1-496
Cow position:
Alignm length: 518
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 100

Conread position: 1-501
Cow position:
Alignm length: 527
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-569
Cow position:
Alignm length: 590
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 167

Conread position: 1-599
Cow position:
Alignm length: 613
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 169

Conread position: 1-660
Cow position:
Alignm length: 694
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 55

Conread position: 1-681
Cow position:
Alignm length: 711
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-686
Cow position:
Alignm length: 717
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 98

Conread position: 1-688
Cow position:
Alignm length: 707
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 199

Conread position: 1-698
Cow position:
Alignm length: 729
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 29

Conread position: 1-703
Cow position:
Alignm length: 735
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 100

Conread position: 1-705
Cow position:
Alignm length: 735
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 219

Conread position: 1-707
Cow position:
Alignm length: 738
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 743
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 92

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 731
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 36

Conread position: 1-707
Cow position:
Alignm length: 734
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 31

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-707
Cow position:
Alignm length: 731
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 51

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 135

Conread position: 1-707
Cow position:
Alignm length: 748
Alignm identity: 460
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 7

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-707
Cow position:
Alignm length: 753
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-707
Cow position:
Alignm length: 738
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 137

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 1-707
Cow position:
Alignm length: 731
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 745
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 89

Conread position: 2-404
Cow position:
Alignm length: 419
Alignm identity: 283
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 43, 157

Conread position: 2-496
Cow position:
Alignm length: 514
Alignm identity: 322
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 151

Conread position: 2-605
Cow position:
Alignm length: 628
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 2-669
Cow position:
Alignm length: 694
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 50

Conread position: 2-705
Cow position:
Alignm length: 736
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 120

Conread position: 2-707
Cow position:
Alignm length: 738
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 132

Conread position: 2-707
Cow position:
Alignm length: 736
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 50

Conread position: 2-707
Cow position:
Alignm length: 723
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 131

Conread position: 2-707
Cow position:
Alignm length: 737
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 113

Conread position: 5-707
Cow position:
Alignm length: 724
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 17

Conread position: 7-707
Cow position:
Alignm length: 734
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 147

Conread position: 7-708
Cow position:
Alignm length: 732
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 24

Conread position: 10-707
Cow position:
Alignm length: 758
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 160

Conread position: 20-413
Cow position:
Alignm length: 402
Alignm identity: 261
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 23, 55

Conread position: 27-330
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 23

Conread position: 40-567
Cow position:
Alignm length: 555
Alignm identity: 358
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 39, 29

Conread position: 70-477
Cow position:
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 96

Conread position: 84-703
Cow position:
Alignm length: 658
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 109

Conread position: 116-698
Cow position:
Alignm length: 612
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 38

Conread position: 121-686
Cow position:
Alignm length: 580
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 42

Conread position: 128-413
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 82

Conread position: 128-492
Cow position:
Alignm length: 389
Alignm identity: 256
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 31, 82

Conread position: 128-701
Cow position:
Alignm length: 603
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 608
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 102

Conread position: 128-707
Cow position:
Alignm length: 606
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 64

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 82

Conread position: 128-707
Cow position:
Alignm length: 603
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 128-707
Cow position:
Alignm length: 607
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 83

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 603
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 63

Conread position: 128-707
Cow position:
Alignm length: 610
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 611
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 65

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 83

Conread position: 128-707
Cow position:
Alignm length: 615
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 128-708
Cow position:
Alignm length: 604
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 134-707
Cow position:
Alignm length: 606
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 77

Conread position: 136-707
Cow position:
Alignm length: 601
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 71

Conread position: 138-493
Cow position:
Alignm length: 380
Alignm identity: 252
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 353

Conread position: 138-669
Cow position:
Alignm length: 565
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 138-686
Cow position:
Alignm length: 578
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 138-707
Cow position:
Alignm length: 599
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 157-573
Cow position:
Alignm length: 430
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 121

Conread position: 157-682
Cow position:
Alignm length: 543
Alignm identity: 344
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 27

Conread position: 158-411
Cow position:
Alignm length: 264
Alignm identity: 175
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 582
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 27

Conread position: 158-708
Cow position:
Alignm length: 580
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 303

Conread position: 159-310
Cow position:
Alignm length: 152
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 159-706
Cow position:
Alignm length: 567
Alignm identity: 364
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 150, 71

Conread position: 164-668
Cow position:
Alignm length: 526
Alignm identity: 338
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 93

Conread position: 164-698
Cow position:
Alignm length: 571
Alignm identity: 369
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 95

Conread position: 164-707
Cow position:
Alignm length: 557
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 43

Conread position: 166-493
Cow position:
Alignm length: 339
Alignm identity: 223
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 153, 144

Conread position: 171-566
Cow position:
Alignm length: 420
Alignm identity: 281
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 37

Conread position: 172-702
Cow position:
Alignm length: 543
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 416

Conread position: 172-703
Cow position:
Alignm length: 547
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 184

Conread position: 172-707
Cow position:
Alignm length: 562
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 39

Conread position: 174-510
Cow position:
Alignm length: 344
Alignm identity: 214
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 85

Conread position: 185-706
Cow position:
Alignm length: 549
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 368

Conread position: 193-707
Cow position:
Alignm length: 536
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 143

Conread position: 194-662
Cow position:
Alignm length: 492
Alignm identity: 308
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 54

Conread position: 196-707
Cow position:
Alignm length: 539
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 51

Conread position: 214-707
Cow position:
Alignm length: 522
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 477

Conread position: 228-707
Cow position:
Alignm length: 506
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 271

Conread position: 229-572
Cow position:
Alignm length: 366
Alignm identity: 241
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 257

Conread position: 232-487
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 232-706
Cow position:
Alignm length: 501
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 291

Conread position: 245-707
Cow position:
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 324

Conread position: 307-707
Cow position:
Alignm length: 433
Alignm identity: 291
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 274

Conread position: 317-706
Cow position:
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 225

Conread position: 317-707
Cow position:
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 225

Conread position: 318-707
Cow position:
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 224

Conread position: 324-686
Cow position:
Alignm length: 392
Alignm identity: 265
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 27, 336

Conread position: 335-626
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 8, 286

Conread position: 354-708
Cow position:
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 320

Conread position: 359-698
Cow position:
Alignm length: 356
Alignm identity: 242
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 58, 137

Conread position: 367-705
Cow position:
Alignm length: 352
Alignm identity: 230
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 141

Conread position: 392-707
Cow position:
Alignm length: 325
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 136

Conread position: 406-707
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 66

Conread position: 421-707
Cow position:
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 421-707
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 422-706
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 266, 43

Conread position: 440-708
Cow position:
Alignm length: 273
Alignm identity: 193
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 58, 244

Conread position: 446-707
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 52, 38

Conread position: 465-707
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 63

Conread position: 473-699
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 104, 27

Conread position: 480-707
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 123

Conread position: 542-707
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 97

Conread position: 558-707
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 130, 5

Conread position: 558-707
Cow position:
Alignm length: 151
Alignm identity: 122
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 129, 118

Conread position: 572-698
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.