Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-299
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 134

Conread position: 1-328
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 169

Conread position: 1-367
Cow position:
Alignm length: 380
Alignm identity: 254
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 132

Conread position: 1-413
Cow position:
Alignm length: 426
Alignm identity: 285
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 114

Conread position: 1-413
Cow position:
Alignm length: 426
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-542
Cow position:
Alignm length: 568
Alignm identity: 368
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 87

Conread position: 1-557
Cow position:
Alignm length: 579
Alignm identity: 367
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 87

Conread position: 1-566
Cow position:
Alignm length: 589
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-588
Cow position:
Alignm length: 619
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-625
Cow position:
Alignm length: 653
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 90

Conread position: 1-683
Cow position:
Alignm length: 714
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 119

Conread position: 1-686
Cow position:
Alignm length: 718
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-686
Cow position:
Alignm length: 719
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 1-686
Cow position:
Alignm length: 712
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 82

Conread position: 1-692
Cow position:
Alignm length: 719
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-697
Cow position:
Alignm length: 734
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 133

Conread position: 1-698
Cow position:
Alignm length: 733
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-707
Cow position:
Alignm length: 750
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 733
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 723
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 158

Conread position: 1-707
Cow position:
Alignm length: 735
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 752
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 736
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 40

Conread position: 1-707
Cow position:
Alignm length: 751
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 220

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 740
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 751
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 149

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 748
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 122

Conread position: 1-707
Cow position:
Alignm length: 746
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-707
Cow position:
Alignm length: 747
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 2-267
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 122, 78

Conread position: 2-707
Cow position:
Alignm length: 739
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 133

Conread position: 2-707
Cow position:
Alignm length: 725
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 47

Conread position: 2-707
Cow position:
Alignm length: 734
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 133

Conread position: 2-708
Cow position:
Alignm length: 751
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 203

Conread position: 2-708
Cow position:
Alignm length: 737
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 135

Conread position: 2-708
Cow position:
Alignm length: 727
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 132

Conread position: 4-621
Cow position:
Alignm length: 646
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 106

Conread position: 5-575
Cow position:
Alignm length: 590
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 76

Conread position: 7-707
Cow position:
Alignm length: 730
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 15-707
Cow position:
Alignm length: 734
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 100

Conread position: 16-194
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 136

Conread position: 20-342
Cow position:
Alignm length: 329
Alignm identity: 211
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 111

Conread position: 23-707
Cow position:
Alignm length: 713
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 105

Conread position: 27-594
Cow position:
Alignm length: 600
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 34-573
Cow position:
Alignm length: 563
Alignm identity: 366
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 37, 98

Conread position: 53-404
Cow position:
Alignm length: 362
Alignm identity: 236
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 18, 77

Conread position: 67-678
Cow position:
Alignm length: 623
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 23

Conread position: 128-413
Cow position:
Alignm length: 298
Alignm identity: 195
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 82

Conread position: 128-566
Cow position:
Alignm length: 460
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 82

Conread position: 128-700
Cow position:
Alignm length: 599
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 82

Conread position: 128-707
Cow position:
Alignm length: 626
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 82

Conread position: 128-707
Cow position:
Alignm length: 606
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 60

Conread position: 128-707
Cow position:
Alignm length: 602
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 83

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 611
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 606
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 82

Conread position: 128-707
Cow position:
Alignm length: 614
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 134-707
Cow position:
Alignm length: 603
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 277

Conread position: 138-556
Cow position:
Alignm length: 438
Alignm identity: 290
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 72

Conread position: 149-680
Cow position:
Alignm length: 562
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 337

Conread position: 151-707
Cow position:
Alignm length: 576
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 47

Conread position: 156-707
Cow position:
Alignm length: 581
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 51

Conread position: 158-568
Cow position:
Alignm length: 426
Alignm identity: 278
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 155

Conread position: 158-600
Cow position:
Alignm length: 463
Alignm identity: 303
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 41, 52

Conread position: 158-687
Cow position:
Alignm length: 539
Alignm identity: 344
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 254, 51

Conread position: 158-707
Cow position:
Alignm length: 582
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 158-707
Cow position:
Alignm length: 581
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 577
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 158-707
Cow position:
Alignm length: 591
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 50

Conread position: 158-708
Cow position:
Alignm length: 571
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 30

Conread position: 159-300
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 159-542
Cow position:
Alignm length: 408
Alignm identity: 274
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 51

Conread position: 163-707
Cow position:
Alignm length: 569
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 45

Conread position: 164-707
Cow position:
Alignm length: 562
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 58

Conread position: 165-647
Cow position:
Alignm length: 504
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 165-686
Cow position:
Alignm length: 539
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 13

Conread position: 169-686
Cow position:
Alignm length: 555
Alignm identity: 349
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 59

Conread position: 171-408
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 35

Conread position: 171-573
Cow position:
Alignm length: 419
Alignm identity: 275
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 6, 38

Conread position: 172-572
Cow position:
Alignm length: 418
Alignm identity: 280
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 152, 75

Conread position: 172-703
Cow position:
Alignm length: 558
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 25

Conread position: 172-707
Cow position:
Alignm length: 568
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 12

Conread position: 173-707
Cow position:
Alignm length: 560
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 216

Conread position: 196-707
Cow position:
Alignm length: 543
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 11

Conread position: 202-707
Cow position:
Alignm length: 531
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 172

Conread position: 209-707
Cow position:
Alignm length: 519
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 485

Conread position: 213-679
Cow position:
Alignm length: 471
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 36

Conread position: 213-703
Cow position:
Alignm length: 519
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 278

Conread position: 213-707
Cow position:
Alignm length: 522
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 243

Conread position: 221-707
Cow position:
Alignm length: 512
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 8

Conread position: 225-688
Cow position:
Alignm length: 486
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 473

Conread position: 230-706
Cow position:
Alignm length: 503
Alignm identity: 324
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 246

Conread position: 230-707
Cow position:
Alignm length: 497
Alignm identity: 320
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 181, 81

Conread position: 256-708
Cow position:
Alignm length: 470
Alignm identity: 301
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 54

Conread position: 307-707
Cow position:
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 23

Conread position: 321-707
Cow position:
Alignm length: 401
Alignm identity: 262
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 22, 309

Conread position: 335-707
Cow position:
Alignm length: 389
Alignm identity: 261
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 16, 207

Conread position: 342-707
Cow position:
Alignm length: 375
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 107

Conread position: 362-707
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 31, 171

Conread position: 383-587
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 66

Conread position: 393-707
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 140

Conread position: 408-707
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 85, 167

Conread position: 408-707
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 141

Conread position: 409-708
Cow position:
Alignm length: 308
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 104

Conread position: 415-703
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 225

Conread position: 419-707
Cow position:
Alignm length: 298
Alignm identity: 193
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 30

Conread position: 420-707
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 191

Conread position: 421-686
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 26

Conread position: 421-707
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 77, 202

Conread position: 421-707
Cow position:
Alignm length: 291
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 111

Conread position: 429-688
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 142, 43

Conread position: 446-707
Cow position:
Alignm length: 264
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 42

Conread position: 448-707
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 451-707
Cow position:
Alignm length: 264
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 76

Conread position: 487-707
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 124

Conread position: 528-707
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 549-707
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 141, 116

Conread position: 563-698
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 8

Conread position: 571-698
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 578-698
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 55

Show alignments to all cow chromosomes.