Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063E11.3 |
| Conread position: | 1-299 |
| Cow position: | chr6:40555271-40554976 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-328 |
| Cow position: | chr6:37477572-37477905 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 169 |
| Conread position: | 1-367 |
| Cow position: | chr6:2111614-2111246 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 1-413 |
| Cow position: | chr6:52173-51760 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 45, 114 |
| Conread position: | 1-413 |
| Cow position: | chr6:24238390-24238804 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-542 |
| Cow position: | chr6:64714460-64715014 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 368 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 1-557 |
| Cow position: | chr6:64712893-64713455 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 367 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 1-566 |
| Cow position: | chr6:21686241-21686810 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-588 |
| Cow position: | chr6:39436977-39437591 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-625 |
| Cow position: | chr6:1823900-1823264 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 1-683 |
| Cow position: | chr6:27530656-27529958 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 1-686 |
| Cow position: | chr6:8201071-8201779 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-686 |
| Cow position: | chr6:20561761-20561064 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 1-686 |
| Cow position: | chr6:50498110-50497410 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 1-692 |
| Cow position: | chr6:5951896-5951187 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 1-697 |
| Cow position: | chr6:30275831-30275118 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 133 |
| Conread position: | 1-698 |
| Cow position: | chr6:34893668-34892949 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 1-707 |
| Cow position: | chr6:912970-913712 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 1-707 |
| Cow position: | chr6:3489053-3488330 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr6:7180320-7179626 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 158 |
| Conread position: | 1-707 |
| Cow position: | chr6:15141831-15141110 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr6:21971016-21971756 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr6:27468609-27469321 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 1-707 |
| Cow position: | chr6:30478424-30479169 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 220 |
| Conread position: | 1-707 |
| Cow position: | chr6:35877377-35876648 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 1-707 |
| Cow position: | chr6:36525384-36526113 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr6:38231605-38232347 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 149 |
| Conread position: | 1-707 |
| Cow position: | chr6:55544988-55544257 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 1-707 |
| Cow position: | chr6:65822791-65822056 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 122 |
| Conread position: | 1-707 |
| Cow position: | chr6:65840927-65841654 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 1-707 |
| Cow position: | chr6:65880199-65880937 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 2-267 |
| Cow position: | chr6:4904710-4904449 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 122, 78 |
| Conread position: | 2-707 |
| Cow position: | chr6:3278610-3277880 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 133 |
| Conread position: | 2-707 |
| Cow position: | chr6:12093515-12092822 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 47 |
| Conread position: | 2-707 |
| Cow position: | chr6:15281203-15280482 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 2-708 |
| Cow position: | chr6:11278355-11277625 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 203 |
| Conread position: | 2-708 |
| Cow position: | chr6:28274330-28275053 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 2-708 |
| Cow position: | chr6:66231157-66231863 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 132 |
| Conread position: | 4-621 |
| Cow position: | chr6:65900574-65899938 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 5-575 |
| Cow position: | chr6:10053983-10054544 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 76 |
| Conread position: | 7-707 |
| Cow position: | chr6:19453287-19453987 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 15-707 |
| Cow position: | chr6:3890134-3889409 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 100 |
| Conread position: | 16-194 |
| Cow position: | chr6:35421322-35421138 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 20-342 |
| Cow position: | chr6:13318327-13318012 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 111 |
| Conread position: | 23-707 |
| Cow position: | chr6:33388205-33388900 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 27-594 |
| Cow position: | chr6:6477095-6476505 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 34-573 |
| Cow position: | chr6:47044049-47043502 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 366 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 53-404 |
| Cow position: | chr6:52735789-52736149 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 67-678 |
| Cow position: | chr6:48367844-48368429 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 23 |
| Conread position: | 128-413 |
| Cow position: | chr6:6935664-6935368 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-566 |
| Cow position: | chr6:45671730-45672187 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-700 |
| Cow position: | chr6:7142004-7141408 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 128-707 |
| Cow position: | chr6:332018-331398 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 128-707 |
| Cow position: | chr6:1405766-1405168 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 128-707 |
| Cow position: | chr6:2374171-2374770 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 128-707 |
| Cow position: | chr6:13103520-13104128 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 128-707 |
| Cow position: | chr6:27169037-27169647 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 128-707 |
| Cow position: | chr6:28492050-28491444 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 128-707 |
| Cow position: | chr6:43617176-43617786 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 128-707 |
| Cow position: | chr6:44151081-44150486 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 128-707 |
| Cow position: | chr6:57870543-57869933 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 134-707 |
| Cow position: | chr6:29310960-29311561 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 277 |
| Conread position: | 138-556 |
| Cow position: | chr6:39907627-39908062 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 149-680 |
| Cow position: | chr6:17045543-17046101 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 337 |
| Conread position: | 151-707 |
| Cow position: | chr6:28062837-28063408 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 47 |
| Conread position: | 156-707 |
| Cow position: | chr6:2554202-2554776 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 51 |
| Conread position: | 158-568 |
| Cow position: | chr6:52803914-52804332 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 64, 155 |
| Conread position: | 158-600 |
| Cow position: | chr6:65908926-65909386 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 158-687 |
| Cow position: | chr6:6619905-6619391 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 344 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 254, 51 |
| Conread position: | 158-707 |
| Cow position: | chr6:17598789-17598209 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 158-707 |
| Cow position: | chr6:34126844-34127423 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 158-707 |
| Cow position: | chr6:44028550-44029113 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 158-707 |
| Cow position: | chr6:68026274-68026862 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 158-708 |
| Cow position: | chr6:59741526-59740983 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 159-300 |
| Cow position: | chr6:476588-476729 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-542 |
| Cow position: | chr6:40274751-40275155 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 163-707 |
| Cow position: | chr6:6566110-6566675 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 164-707 |
| Cow position: | chr6:10559138-10558590 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 58 |
| Conread position: | 165-647 |
| Cow position: | chr6:1384342-1383844 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 165-686 |
| Cow position: | chr6:2885746-2886256 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 13 |
| Conread position: | 169-686 |
| Cow position: | chr6:11353238-11353789 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 349 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 171-408 |
| Cow position: | chr6:28106255-28106016 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 139, 35 |
| Conread position: | 171-573 |
| Cow position: | chr6:13978048-13978449 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 172-572 |
| Cow position: | chr6:65007352-65007763 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 280 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 152, 75 |
| Conread position: | 172-703 |
| Cow position: | chr6:59919767-59919212 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 25 |
| Conread position: | 172-707 |
| Cow position: | chr6:701461-702025 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 173-707 |
| Cow position: | chr6:68362807-68362252 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 216 |
| Conread position: | 196-707 |
| Cow position: | chr6:42926913-42927453 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 202-707 |
| Cow position: | chr6:42723383-42722857 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 172 |
| Conread position: | 209-707 |
| Cow position: | chr6:65927489-65928006 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 485 |
| Conread position: | 213-679 |
| Cow position: | chr6:35421012-35420554 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 36 |
| Conread position: | 213-703 |
| Cow position: | chr6:13943461-13943974 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 278 |
| Conread position: | 213-707 |
| Cow position: | chr6:58409360-58408842 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 243 |
| Conread position: | 221-707 |
| Cow position: | chr6:8761744-8761234 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 225-688 |
| Cow position: | chr6:26671298-26670814 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 473 |
| Conread position: | 230-706 |
| Cow position: | chr6:28474274-28474771 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 80, 246 |
| Conread position: | 230-707 |
| Cow position: | chr6:16671967-16672452 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 181, 81 |
| Conread position: | 256-708 |
| Cow position: | chr6:525849-526309 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 99, 54 |
| Conread position: | 307-707 |
| Cow position: | chr6:37115788-37116209 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 321-707 |
| Cow position: | chr6:40554922-40554524 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 22, 309 |
| Conread position: | 335-707 |
| Cow position: | chr6:41552705-41553086 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 16, 207 |
| Conread position: | 342-707 |
| Cow position: | chr6:62396853-62397226 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 362-707 |
| Cow position: | chr6:37642105-37642471 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 31, 171 |
| Conread position: | 383-587 |
| Cow position: | chr6:49520664-49520457 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 393-707 |
| Cow position: | chr6:15476023-15476346 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 408-707 |
| Cow position: | chr6:13846811-13847105 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 85, 167 |
| Conread position: | 408-707 |
| Cow position: | chr6:16051649-16051950 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 141 |
| Conread position: | 409-708 |
| Cow position: | chr6:1100820-1100516 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 89, 104 |
| Conread position: | 415-703 |
| Cow position: | chr6:33459634-33459929 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 20, 225 |
| Conread position: | 419-707 |
| Cow position: | chr6:12528609-12528904 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 30 |
| Conread position: | 420-707 |
| Cow position: | chr6:13276578-13276870 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 191 |
| Conread position: | 421-686 |
| Cow position: | chr6:10640905-10641174 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 421-707 |
| Cow position: | chr6:13317709-13317419 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 77, 202 |
| Conread position: | 421-707 |
| Cow position: | chr6:35433320-35433604 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 77, 111 |
| Conread position: | 429-688 |
| Cow position: | chr6:32330993-32330741 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 142, 43 |
| Conread position: | 446-707 |
| Cow position: | chr6:43793956-43793700 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 448-707 |
| Cow position: | chr6:24238868-24239135 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 451-707 |
| Cow position: | chr6:1412131-1411870 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 117, 76 |
| Conread position: | 487-707 |
| Cow position: | chr6:25214102-25214328 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 124 |
| Conread position: | 528-707 |
| Cow position: | chr6:7866867-7866681 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 549-707 |
| Cow position: | chr6:39908440-39908597 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 141, 116 |
| Conread position: | 563-698 |
| Cow position: | chr6:3148931-3149065 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 127, 8 |
| Conread position: | 571-698 |
| Cow position: | chr6:64715163-64715291 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 578-698 |
| Cow position: | chr6:47043264-47043143 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 55 |
Show alignments to all cow chromosomes.