Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-147
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 1-282
Cow position:
Alignm length: 287
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 117

Conread position: 1-288
Cow position:
Alignm length: 297
Alignm identity: 195
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 138

Conread position: 1-341
Cow position:
Alignm length: 347
Alignm identity: 234
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 130

Conread position: 1-344
Cow position:
Alignm length: 351
Alignm identity: 219
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 49

Conread position: 1-375
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 1-419
Cow position:
Alignm length: 432
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-468
Cow position:
Alignm length: 489
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 1-560
Cow position:
Alignm length: 581
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 1-575
Cow position:
Alignm length: 587
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 1-686
Cow position:
Alignm length: 713
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 134

Conread position: 1-687
Cow position:
Alignm length: 712
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 48

Conread position: 1-698
Cow position:
Alignm length: 732
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 1-706
Cow position:
Alignm length: 743
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 338

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 18

Conread position: 1-707
Cow position:
Alignm length: 736
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 729
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 82

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 733
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 734
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 750
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 137

Conread position: 1-707
Cow position:
Alignm length: 758
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 134

Conread position: 1-707
Cow position:
Alignm length: 742
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-708
Cow position:
Alignm length: 741
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-708
Cow position:
Alignm length: 742
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 1-708
Cow position:
Alignm length: 732
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 2-707
Cow position:
Alignm length: 737
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 195

Conread position: 2-708
Cow position:
Alignm length: 724
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 195

Conread position: 3-707
Cow position:
Alignm length: 717
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 49

Conread position: 4-707
Cow position:
Alignm length: 729
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 77

Conread position: 4-707
Cow position:
Alignm length: 727
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 5-697
Cow position:
Alignm length: 722
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 7-707
Cow position:
Alignm length: 737
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 131

Conread position: 7-707
Cow position:
Alignm length: 729
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 71

Conread position: 7-708
Cow position:
Alignm length: 717
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 8-413
Cow position:
Alignm length: 413
Alignm identity: 264
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 65, 39

Conread position: 14-338
Cow position:
Alignm length: 333
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 181

Conread position: 20-707
Cow position:
Alignm length: 715
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 113

Conread position: 21-707
Cow position:
Alignm length: 718
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 93

Conread position: 28-428
Cow position:
Alignm length: 408
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 141

Conread position: 30-707
Cow position:
Alignm length: 707
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 40-703
Cow position:
Alignm length: 692
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 37

Conread position: 59-707
Cow position:
Alignm length: 685
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 160

Conread position: 74-568
Cow position:
Alignm length: 525
Alignm identity: 351
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 122

Conread position: 124-707
Cow position:
Alignm length: 609
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 63

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 610
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 128-707
Cow position:
Alignm length: 612
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 59

Conread position: 128-707
Cow position:
Alignm length: 602
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 449

Conread position: 129-708
Cow position:
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 138-411
Cow position:
Alignm length: 286
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 72

Conread position: 138-707
Cow position:
Alignm length: 597
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 145-568
Cow position:
Alignm length: 445
Alignm identity: 299
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 161, 18

Conread position: 152-707
Cow position:
Alignm length: 572
Alignm identity: 362
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 33

Conread position: 153-683
Cow position:
Alignm length: 554
Alignm identity: 335
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 158, 35

Conread position: 157-707
Cow position:
Alignm length: 581
Alignm identity: 376
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 154, 66

Conread position: 158-707
Cow position:
Alignm length: 580
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 158-707
Cow position:
Alignm length: 580
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 51

Conread position: 158-707
Cow position:
Alignm length: 575
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 578
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 158-707
Cow position:
Alignm length: 563
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 163-698
Cow position:
Alignm length: 559
Alignm identity: 361
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 151, 30

Conread position: 164-688
Cow position:
Alignm length: 538
Alignm identity: 337
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 150, 45

Conread position: 164-707
Cow position:
Alignm length: 579
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 126

Conread position: 167-708
Cow position:
Alignm length: 573
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 171-548
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 143, 29

Conread position: 172-708
Cow position:
Alignm length: 573
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 35

Conread position: 173-468
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 7, 0

Conread position: 174-340
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 180-707
Cow position:
Alignm length: 575
Alignm identity: 360
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 100, 410

Conread position: 191-703
Cow position:
Alignm length: 548
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 192-413
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 119, 13

Conread position: 195-699
Cow position:
Alignm length: 530
Alignm identity: 333
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 60

Conread position: 209-707
Cow position:
Alignm length: 525
Alignm identity: 351
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 78

Conread position: 212-707
Cow position:
Alignm length: 514
Alignm identity: 329
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 109, 55

Conread position: 213-496
Cow position:
Alignm length: 301
Alignm identity: 196
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 213-707
Cow position:
Alignm length: 514
Alignm identity: 324
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 101, 17

Conread position: 214-708
Cow position:
Alignm length: 521
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 217-707
Cow position:
Alignm length: 516
Alignm identity: 321
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 99

Conread position: 225-707
Cow position:
Alignm length: 505
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 405

Conread position: 228-707
Cow position:
Alignm length: 508
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 292

Conread position: 228-707
Cow position:
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 11

Conread position: 232-698
Cow position:
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 305

Conread position: 235-625
Cow position:
Alignm length: 420
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 257

Conread position: 238-694
Cow position:
Alignm length: 485
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 248-707
Cow position:
Alignm length: 487
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 251-707
Cow position:
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 27

Conread position: 264-665
Cow position:
Alignm length: 410
Alignm identity: 280
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 67, 42

Conread position: 293-707
Cow position:
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 317

Conread position: 313-708
Cow position:
Alignm length: 421
Alignm identity: 280
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 27

Conread position: 323-707
Cow position:
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 324-707
Cow position:
Alignm length: 396
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 354-707
Cow position:
Alignm length: 366
Alignm identity: 233
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 57, 189

Conread position: 357-707
Cow position:
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 210

Conread position: 359-682
Cow position:
Alignm length: 334
Alignm identity: 221
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 54, 161

Conread position: 367-705
Cow position:
Alignm length: 360
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 64

Conread position: 416-707
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 0

Conread position: 416-707
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 420-686
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 229, 75

Conread position: 420-703
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 78, 16

Conread position: 420-707
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 421-707
Cow position:
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 107

Conread position: 421-707
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 77, 0

Conread position: 421-707
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 138

Conread position: 421-707
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 422-708
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 234

Conread position: 425-708
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 47

Conread position: 429-678
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 16, 8

Conread position: 429-686
Cow position:
Alignm length: 266
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 43

Conread position: 429-698
Cow position:
Alignm length: 277
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 99

Conread position: 432-707
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 433-701
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 257, 56

Conread position: 433-707
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 146, 72

Conread position: 440-707
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 35, 30

Conread position: 446-679
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 52, 24

Conread position: 452-707
Cow position:
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 504-707
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 67, 107

Conread position: 521-707
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 58

Conread position: 538-707
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 150, 63

Show alignments to all cow chromosomes.