Cow genome map

Conread name: Ss1.1-Pig4-TMW8063E11.3

Conread position: 1-303
Cow position:
Alignm length: 307
Alignm identity: 202
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 129

Conread position: 1-310
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 127

Conread position: 1-341
Cow position:
Alignm length: 351
Alignm identity: 236
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 33, 205

Conread position: 1-342
Cow position:
Alignm length: 346
Alignm identity: 244
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 70, 147

Conread position: 1-353
Cow position:
Alignm length: 364
Alignm identity: 241
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 134

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 118

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 281
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 45, 134

Conread position: 1-460
Cow position:
Alignm length: 478
Alignm identity: 309
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 44

Conread position: 1-532
Cow position:
Alignm length: 541
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 1-533
Cow position:
Alignm length: 558
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 1-575
Cow position:
Alignm length: 603
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 1-582
Cow position:
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 10

Conread position: 1-590
Cow position:
Alignm length: 607
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 428

Conread position: 1-597
Cow position:
Alignm length: 628
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-602
Cow position:
Alignm length: 633
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 133

Conread position: 1-680
Cow position:
Alignm length: 709
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-686
Cow position:
Alignm length: 716
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 86

Conread position: 1-698
Cow position:
Alignm length: 730
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-698
Cow position:
Alignm length: 724
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 134

Conread position: 1-698
Cow position:
Alignm length: 726
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 134

Conread position: 1-707
Cow position:
Alignm length: 751
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 132

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 92

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 114

Conread position: 1-707
Cow position:
Alignm length: 733
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 132

Conread position: 1-707
Cow position:
Alignm length: 735
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 744
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 7

Conread position: 1-707
Cow position:
Alignm length: 738
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 132

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 49

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 126

Conread position: 1-707
Cow position:
Alignm length: 734
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 134

Conread position: 1-707
Cow position:
Alignm length: 736
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 733
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 126

Conread position: 1-707
Cow position:
Alignm length: 742
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 1-707
Cow position:
Alignm length: 752
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 108

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 741
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 131

Conread position: 1-707
Cow position:
Alignm length: 737
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 1-707
Cow position:
Alignm length: 759
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 133

Conread position: 1-707
Cow position:
Alignm length: 739
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 2-245
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 69, 48

Conread position: 2-698
Cow position:
Alignm length: 712
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 16

Conread position: 2-698
Cow position:
Alignm length: 716
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 30

Conread position: 2-707
Cow position:
Alignm length: 730
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 37

Conread position: 2-707
Cow position:
Alignm length: 731
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 99

Conread position: 2-707
Cow position:
Alignm length: 745
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 144

Conread position: 2-707
Cow position:
Alignm length: 743
Alignm identity: 458
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 118

Conread position: 2-707
Cow position:
Alignm length: 734
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 166

Conread position: 3-707
Cow position:
Alignm length: 737
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 132

Conread position: 5-248
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 144

Conread position: 5-387
Cow position:
Alignm length: 395
Alignm identity: 267
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 44, 191

Conread position: 5-434
Cow position:
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 21

Conread position: 7-444
Cow position:
Alignm length: 450
Alignm identity: 291
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 112

Conread position: 7-707
Cow position:
Alignm length: 744
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 78

Conread position: 7-707
Cow position:
Alignm length: 752
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 7-708
Cow position:
Alignm length: 746
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 402

Conread position: 13-701
Cow position:
Alignm length: 717
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 117

Conread position: 14-707
Cow position:
Alignm length: 722
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 172

Conread position: 15-702
Cow position:
Alignm length: 725
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 40-708
Cow position:
Alignm length: 694
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 116

Conread position: 42-510
Cow position:
Alignm length: 485
Alignm identity: 312
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 29, 107

Conread position: 52-492
Cow position:
Alignm length: 463
Alignm identity: 308
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 80

Conread position: 52-707
Cow position:
Alignm length: 685
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 80

Conread position: 128-413
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 82

Conread position: 128-496
Cow position:
Alignm length: 384
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 82

Conread position: 128-542
Cow position:
Alignm length: 440
Alignm identity: 292
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 20, 82

Conread position: 128-596
Cow position:
Alignm length: 493
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 346

Conread position: 128-707
Cow position:
Alignm length: 604
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 128-707
Cow position:
Alignm length: 613
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 128-707
Cow position:
Alignm length: 614
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 59

Conread position: 128-707
Cow position:
Alignm length: 609
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 532

Conread position: 130-707
Cow position:
Alignm length: 614
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 80

Conread position: 138-615
Cow position:
Alignm length: 506
Alignm identity: 334
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 52

Conread position: 138-707
Cow position:
Alignm length: 596
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 138-707
Cow position:
Alignm length: 601
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 158-707
Cow position:
Alignm length: 561
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 581
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 569
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 579
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 158-707
Cow position:
Alignm length: 570
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 159-511
Cow position:
Alignm length: 373
Alignm identity: 256
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 151, 88

Conread position: 159-692
Cow position:
Alignm length: 562
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 159-707
Cow position:
Alignm length: 585
Alignm identity: 371
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 50

Conread position: 164-707
Cow position:
Alignm length: 576
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 44

Conread position: 165-696
Cow position:
Alignm length: 553
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 43

Conread position: 171-707
Cow position:
Alignm length: 574
Alignm identity: 369
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 155, 356

Conread position: 172-684
Cow position:
Alignm length: 543
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 178

Conread position: 172-707
Cow position:
Alignm length: 567
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 49

Conread position: 175-369
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 175-459
Cow position:
Alignm length: 307
Alignm identity: 206
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 185-707
Cow position:
Alignm length: 546
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 224-703
Cow position:
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 172

Conread position: 237-698
Cow position:
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 97

Conread position: 237-707
Cow position:
Alignm length: 500
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 440

Conread position: 265-707
Cow position:
Alignm length: 469
Alignm identity: 306
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 382

Conread position: 290-660
Cow position:
Alignm length: 399
Alignm identity: 269
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 26, 335

Conread position: 312-678
Cow position:
Alignm length: 374
Alignm identity: 241
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 38

Conread position: 317-707
Cow position:
Alignm length: 411
Alignm identity: 280
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 38, 17

Conread position: 321-525
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 325-698
Cow position:
Alignm length: 397
Alignm identity: 265
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 65

Conread position: 325-707
Cow position:
Alignm length: 404
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 349-707
Cow position:
Alignm length: 364
Alignm identity: 241
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 74

Conread position: 407-626
Cow position:
Alignm length: 221
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 63

Conread position: 408-698
Cow position:
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 409-707
Cow position:
Alignm length: 304
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 91, 76

Conread position: 413-625
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 16

Conread position: 416-707
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 16

Conread position: 416-707
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 82, 105

Conread position: 420-597
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 420-654
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 156, 47

Conread position: 422-683
Cow position:
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 422-707
Cow position:
Alignm length: 288
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 157

Conread position: 422-707
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 76, 85

Conread position: 426-707
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 152

Conread position: 427-679
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 428-706
Cow position:
Alignm length: 286
Alignm identity: 197
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 429-706
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 69, 143

Conread position: 437-706
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 156

Conread position: 458-707
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 41

Conread position: 492-706
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 41

Conread position: 494-707
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 530-698
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 543-707
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 564-707
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 11

Conread position: 571-708
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 62

Show alignments to all cow chromosomes.